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The map label for this gene is 188584740

Identifier: 188584740

GI number: 188584740

Start: 112959

End: 113333

Strand: Direct

Name: 188584740

Synonym: Nther_0098

Alternate gene names: NA

Gene position: 112959-113333 (Clockwise)

Preceding gene: 188584739

Following gene: 188584741

Centisome position: 3.57

GC content: 34.93

Gene sequence:

>375_bases
TTGTCGAAATTAAAATCACTGGAAGATTTAAAAAAATATCGAGAACAAGCGAAAAATAGTACTGAAGTTAGAAAGACAAA
TGAAAATATGGTGATTGTAGGAATGGGTACTTGTGGTATCGCGGCTGGCGCTCGAGAAGTTATGAACGCCCTATTAGAAG
AATTAAATAAAAGAAGTCTAAAGGAAATTACAGTTACCCAAACTGGATGTATTGGAATGTGTGAAAATGAAGTCTTAGTG
GATGTCAAAAAACAAGGGGAAGAACGAATCACTTATGGAAATGTAACCCCTGAGGATATACCCAGGATAGTAAATGATCA
CCTTATTAATGGCAAATTAGTCCAAGATTTAGTGATTGGTAAACCTAATCAGTAA

Upstream 100 bases:

>100_bases
GAAATTGTTCATCAAAATGCCTTTCGAGATTTAGAAGTGCTTATGTGGGTAAAACAATACCTTGAAGAAAATATTACTTC
GTTAAATGGGGGTGACTAGA

Downstream 100 bases:

>100_bases
TTGGGAGAGGAGGGGATAAAAATGGAAGTGTATCGATCTCATGTTTTGATATGCGGTGGTACTGGTTGTAGTTCATCCGG
ATGTCAACAAGTGCAAGATA

Product: ferredoxin-like protein

Products: NAD+; ubiquinol

Alternate protein names: NADP-Reducing Hydrogenase Subunit B; Ferredoxin-Like Protein; Ferredoxin; NAD(P)-Dependent Iron-Only Hydrogenase Iron-Sulfur Protein; NADP-Reducing Hydrogenase Chain B; NADH Dehydrogenase I F Subunit; NAD-Dependent Formate Dehydrogenase Beta Subunit; Ferredoxin 2Fe-2S; NADH-Quinone Oxidoreductase Subunit F

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSKLKSLEDLKKYREQAKNSTEVRKTNENMVIVGMGTCGIAAGAREVMNALLEELNKRSLKEITVTQTGCIGMCENEVLV
DVKKQGEERITYGNVTPEDIPRIVNDHLINGKLVQDLVIGKPNQ

Sequences:

>Translated_124_residues
MSKLKSLEDLKKYREQAKNSTEVRKTNENMVIVGMGTCGIAAGAREVMNALLEELNKRSLKEITVTQTGCIGMCENEVLV
DVKKQGEERITYGNVTPEDIPRIVNDHLINGKLVQDLVIGKPNQ
>Mature_123_residues
SKLKSLEDLKKYREQAKNSTEVRKTNENMVIVGMGTCGIAAGAREVMNALLEELNKRSLKEITVTQTGCIGMCENEVLVD
VKKQGEERITYGNVTPEDIPRIVNDHLINGKLVQDLVIGKPNQ

Specific function: Unknown

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3

Molecular weight: Translated: 13785; Mature: 13654

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLKSLEDLKKYREQAKNSTEVRKTNENMVIVGMGTCGIAAGAREVMNALLEELNKRSL
CCCCHHHHHHHHHHHHHCCCCHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
KEITVTQTGCIGMCENEVLVDVKKQGEERITYGNVTPEDIPRIVNDHLINGKLVQDLVIG
HHHHCCCCCCCCCCCCCEEEEEHHCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCC
KPNQ
CCCC
>Mature Secondary Structure 
SKLKSLEDLKKYREQAKNSTEVRKTNENMVIVGMGTCGIAAGAREVMNALLEELNKRSL
CCCHHHHHHHHHHHHHCCCCHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
KEITVTQTGCIGMCENEVLVDVKKQGEERITYGNVTPEDIPRIVNDHLINGKLVQDLVIG
HHHHCCCCCCCCCCCCCEEEEEHHCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCC
KPNQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA