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The map label for this gene is 188584679

Identifier: 188584679

GI number: 188584679

Start: 50786

End: 51847

Strand: Direct

Name: 188584679

Synonym: Nther_0037

Alternate gene names: NA

Gene position: 50786-51847 (Clockwise)

Preceding gene: 188584677

Following gene: 188584680

Centisome position: 1.6

GC content: 36.35

Gene sequence:

>1062_bases
ATGACTAAAGTTGTATGCCCTAGATGCAATAATAACTGCTCTGACAAGTTTTATAGGTTTGGTTTTGATAATCATGGTCA
TCAAAAGTATCAATGTCAAGAATGTTTTAGTCAGTTTGCACCTAAGACACTTTCTAAAGGCGGGGATAAAAGAGGTCCTA
ATAAACCTCGTAAATATCCCTCTTGCCCTAAATGCGGTAAAGCTACATTTTTACATCACGACTATGAATTTTATTCTAAT
TTGAGGTGTTGGGACAAAAGCTGTAATCATTCTTTCTATGTCCCTAAACCTCAAAGTATTCCTGAACCTTCGCAACTTGA
TATTGACGGCAAAGTAGACTTCTCTAACATGAGACATTCTCTTCATACTGTTATTCGAGCTCTTTACCTGTACTTTATCA
ATGGTAGCTCTACTAGAGGTGTCTCACAGTTCCTTATTGATTGTGAAGGAATTAAAGTATCTCATGTTACTATTGCTGAC
TGGACTAAAAAGTTTGCTCCTCTGTTTCTTTATATCTCTAGATATCTAAAGCCAATAGATCTTGACTCTTCTGATGAGTG
GCATGTCGACGAAACTGTAATTAAAATTAAAGGCAAAAGATTCTACGCCTGGACTGTTATTGATGCTGAAACTAGATTTG
TGCTTGCATTTCATCTATCTCCTTACAGAGATAGCCAGGCTGCTTTTAAAGTGCTGAACTATGCTAAGAAACATTTTGGA
CAGCCTCATAGTATCGTTACAGATAGATACTGGGCTTACAATGCTCCAATTAAAGTTCTGTTTCCAAACTCTAATCACAT
CAGAGTCGAGTCTTTTCAAGATGATATCTCTAATAACTTAATTGAATCTTTTTTTCAGATTTTCAAAAGCTGGGTTAAGC
AACGCAGAGGATTTGCTTCTTTCCAGTCAGCCAACAAGTTGATTGCGGTATTTGTGTTTGCTTTTAACTTTGTTAGGACA
AGCAATGTTTTGAATCAGTCTACTCCTGCTCAAGTTGCTGGGATTAATTACTCTAATCGTAATAGGACTTTTTGGCTTTT
ACATAGTAATAATGCCGCTTGA

Upstream 100 bases:

>100_bases
AGTTCTGTTAAGTTATATGATATTTGAATCAGTCTCCGTCCCGGAGTTAAGATAGTTTTAGACAGAAATCAAAACCCTCC
GGGAGAAAGGAGACTGATCC

Downstream 100 bases:

>100_bases
CTGCCAAATCTTTTGAAATCTTGCGAGCAAATGAGCTTATTTTTCATAACAACTTAACAGACTCTATAATAATTACTATT
TTCATATTATACCATAATTT

Product: Integrase catalytic region

Products: NA

Alternate protein names: Integrase Catalytic Region; IS6 Family Transposase; Integrase Core Domain Protein; ISCpe7 Transposase; Integrase Catalytic Subunit; Transposase-Related Protein; LOW QUALITY PROTEIN Integrase; ISYps1 Transposase; IS Element Transposase; Insertion Element; Transposase Protein

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTKVVCPRCNNNCSDKFYRFGFDNHGHQKYQCQECFSQFAPKTLSKGGDKRGPNKPRKYPSCPKCGKATFLHHDYEFYSN
LRCWDKSCNHSFYVPKPQSIPEPSQLDIDGKVDFSNMRHSLHTVIRALYLYFINGSSTRGVSQFLIDCEGIKVSHVTIAD
WTKKFAPLFLYISRYLKPIDLDSSDEWHVDETVIKIKGKRFYAWTVIDAETRFVLAFHLSPYRDSQAAFKVLNYAKKHFG
QPHSIVTDRYWAYNAPIKVLFPNSNHIRVESFQDDISNNLIESFFQIFKSWVKQRRGFASFQSANKLIAVFVFAFNFVRT
SNVLNQSTPAQVAGINYSNRNRTFWLLHSNNAA

Sequences:

>Translated_353_residues
MTKVVCPRCNNNCSDKFYRFGFDNHGHQKYQCQECFSQFAPKTLSKGGDKRGPNKPRKYPSCPKCGKATFLHHDYEFYSN
LRCWDKSCNHSFYVPKPQSIPEPSQLDIDGKVDFSNMRHSLHTVIRALYLYFINGSSTRGVSQFLIDCEGIKVSHVTIAD
WTKKFAPLFLYISRYLKPIDLDSSDEWHVDETVIKIKGKRFYAWTVIDAETRFVLAFHLSPYRDSQAAFKVLNYAKKHFG
QPHSIVTDRYWAYNAPIKVLFPNSNHIRVESFQDDISNNLIESFFQIFKSWVKQRRGFASFQSANKLIAVFVFAFNFVRT
SNVLNQSTPAQVAGINYSNRNRTFWLLHSNNAA
>Mature_352_residues
TKVVCPRCNNNCSDKFYRFGFDNHGHQKYQCQECFSQFAPKTLSKGGDKRGPNKPRKYPSCPKCGKATFLHHDYEFYSNL
RCWDKSCNHSFYVPKPQSIPEPSQLDIDGKVDFSNMRHSLHTVIRALYLYFINGSSTRGVSQFLIDCEGIKVSHVTIADW
TKKFAPLFLYISRYLKPIDLDSSDEWHVDETVIKIKGKRFYAWTVIDAETRFVLAFHLSPYRDSQAAFKVLNYAKKHFGQ
PHSIVTDRYWAYNAPIKVLFPNSNHIRVESFQDDISNNLIESFFQIFKSWVKQRRGFASFQSANKLIAVFVFAFNFVRTS
NVLNQSTPAQVAGINYSNRNRTFWLLHSNNAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40964; Mature: 40833

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVVCPRCNNNCSDKFYRFGFDNHGHQKYQCQECFSQFAPKTLSKGGDKRGPNKPRKYP
CCCEECCCCCCCCCCHHEECCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC
SCPKCGKATFLHHDYEFYSNLRCWDKSCNHSFYVPKPQSIPEPSQLDIDGKVDFSNMRHS
CCCCCCCEEEEECCHHHHCCCHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHH
LHTVIRALYLYFINGSSTRGVSQFLIDCEGIKVSHVTIADWTKKFAPLFLYISRYLKPID
HHHHHHHHHHEEECCCCCCCHHHHHEECCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCC
LDSSDEWHVDETVIKIKGKRFYAWTVIDAETRFVLAFHLSPYRDSQAAFKVLNYAKKHFG
CCCCCCCCCCCEEEEEECCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC
QPHSIVTDRYWAYNAPIKVLFPNSNHIRVESFQDDISNNLIESFFQIFKSWVKQRRGFAS
CCCCEECCCEEEECCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FQSANKLIAVFVFAFNFVRTSNVLNQSTPAQVAGINYSNRNRTFWLLHSNNAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEECCCCCEEEEEECCCCC
>Mature Secondary Structure 
TKVVCPRCNNNCSDKFYRFGFDNHGHQKYQCQECFSQFAPKTLSKGGDKRGPNKPRKYP
CCEECCCCCCCCCCHHEECCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC
SCPKCGKATFLHHDYEFYSNLRCWDKSCNHSFYVPKPQSIPEPSQLDIDGKVDFSNMRHS
CCCCCCCEEEEECCHHHHCCCHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHH
LHTVIRALYLYFINGSSTRGVSQFLIDCEGIKVSHVTIADWTKKFAPLFLYISRYLKPID
HHHHHHHHHHEEECCCCCCCHHHHHEECCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCC
LDSSDEWHVDETVIKIKGKRFYAWTVIDAETRFVLAFHLSPYRDSQAAFKVLNYAKKHFG
CCCCCCCCCCCEEEEEECCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC
QPHSIVTDRYWAYNAPIKVLFPNSNHIRVESFQDDISNNLIESFFQIFKSWVKQRRGFAS
CCCCEECCCEEEECCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FQSANKLIAVFVFAFNFVRTSNVLNQSTPAQVAGINYSNRNRTFWLLHSNNAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEECCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA