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The map label for this gene is recR

Identifier: 188584659

GI number: 188584659

Start: 28179

End: 28778

Strand: Direct

Name: recR

Synonym: Nther_0017

Alternate gene names: 188584659

Gene position: 28179-28778 (Clockwise)

Preceding gene: 188584658

Following gene: 188584660

Centisome position: 0.89

GC content: 37.33

Gene sequence:

>600_bases
ATGTCTAATTATCCGAAACCTATTAATCGCTTAATTGAAGCTCTTTCATATCTTCCCGGAATTGGACCTAAAACTGCAGA
ACGACTGGCATTTCATATTGTTTCAATGGACGAAACCAAAGTGAATCATTTAATTACAGCCCTGCAGGACTCTAGAGACA
AAGTTTTTGAATGCAGCACTTGTAATAATTTAACAGATAAAGATCCTTGTACAATTTGTCAGGATGAAAGTCGTGATAGT
AATTTGATTTGTGTAGTGCAAGATGCCAGAGATGTGACTGCAATTGAAAAAGTTCAAGATTTTCAAGGAAAGTATCATGT
GCTGCAAGGAGTTATTTCTCCTATGGAAGGTATTGGCCCTGATGATTTAAATTTGAAGGCTTTAATGGATCGGATCCAAG
GAGAAGGAATTACTGAACTAGTTGTAGCTACCGATCCTACTGTTGAAGGTGAAGCTACGGCTATGTATTTAAATAAACTT
GTCAAACCATTAGGAGTAAGAGTTACTCGATTAGCTTATGGACTCCCTATGGGGGGAGATTTAGAATATGCTGATGAAAT
GACATTACAACAAGCCTTTGAAGGACGAAAAGAGTTGTAG

Upstream 100 bases:

>100_bases
GGCAGCAGTGAATGATGGTTTGAAAAATGTAGATGAAATGGTTAGTGAGGAAATGAAAAAAGTAACCGGAGGCATGGATC
TACCTCCGGGGATGTTCTAA

Downstream 100 bases:

>100_bases
GATGTACAAACATCCTGCAACTCTTTTTTTTTAGAAACTGTTATATTTAATTGTTGATACTGTAAATTTTCAATTGATGG
GATTATGCAATAATACAACT

Product: DNA replication and repair protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSNYPKPINRLIEALSYLPGIGPKTAERLAFHIVSMDETKVNHLITALQDSRDKVFECSTCNNLTDKDPCTICQDESRDS
NLICVVQDARDVTAIEKVQDFQGKYHVLQGVISPMEGIGPDDLNLKALMDRIQGEGITELVVATDPTVEGEATAMYLNKL
VKPLGVRVTRLAYGLPMGGDLEYADEMTLQQAFEGRKEL

Sequences:

>Translated_199_residues
MSNYPKPINRLIEALSYLPGIGPKTAERLAFHIVSMDETKVNHLITALQDSRDKVFECSTCNNLTDKDPCTICQDESRDS
NLICVVQDARDVTAIEKVQDFQGKYHVLQGVISPMEGIGPDDLNLKALMDRIQGEGITELVVATDPTVEGEATAMYLNKL
VKPLGVRVTRLAYGLPMGGDLEYADEMTLQQAFEGRKEL
>Mature_198_residues
SNYPKPINRLIEALSYLPGIGPKTAERLAFHIVSMDETKVNHLITALQDSRDKVFECSTCNNLTDKDPCTICQDESRDSN
LICVVQDARDVTAIEKVQDFQGKYHVLQGVISPMEGIGPDDLNLKALMDRIQGEGITELVVATDPTVEGEATAMYLNKLV
KPLGVRVTRLAYGLPMGGDLEYADEMTLQQAFEGRKEL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=42.4870466321244, Blast_Score=171, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_NATTJ (B2A302)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001916204.1
- ProteinModelPortal:   B2A302
- SMR:   B2A302
- GeneID:   6315972
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_0017
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22017; Mature: 21886

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNYPKPINRLIEALSYLPGIGPKTAERLAFHIVSMDETKVNHLITALQDSRDKVFECST
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCC
CNNLTDKDPCTICQDESRDSNLICVVQDARDVTAIEKVQDFQGKYHVLQGVISPMEGIGP
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DDLNLKALMDRIQGEGITELVVATDPTVEGEATAMYLNKLVKPLGVRVTRLAYGLPMGGD
CCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LEYADEMTLQQAFEGRKEL
CCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNYPKPINRLIEALSYLPGIGPKTAERLAFHIVSMDETKVNHLITALQDSRDKVFECST
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCC
CNNLTDKDPCTICQDESRDSNLICVVQDARDVTAIEKVQDFQGKYHVLQGVISPMEGIGP
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DDLNLKALMDRIQGEGITELVVATDPTVEGEATAMYLNKLVKPLGVRVTRLAYGLPMGGD
CCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LEYADEMTLQQAFEGRKEL
CCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA