The gene/protein map for NC_010698 is currently unavailable.
Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

Click here to switch to the map view.

The map label for this gene is 188527281

Identifier: 188527281

GI number: 188527281

Start: 472261

End: 473136

Strand: Direct

Name: 188527281

Synonym: HPSH_02440

Alternate gene names: NA

Gene position: 472261-473136 (Clockwise)

Preceding gene: 188527280

Following gene: 188527282

Centisome position: 29.36

GC content: 40.18

Gene sequence:

>876_bases
ATGAAACGAAGGGATTTTATTAAAACGACTGCTTTAGGCGCTACAAGTGCTGTTTTAGGAGCGCAGATTTTGCAGGCAGA
AGAAAGCAAAGGGAGTGTTGCAAAATATAAAATAGAAGCTCAATACAGCATTGATTTTGATTCTGCAGAGCACACTTCAC
TTTTCATTCCCATGCCGAGTGTTGTAGCGAGCAATGTGCATTTACAAGGCAATCATGCTAACTATAAAAGCATGCTCAAC
TTTGGAGTGCCTTATTTGCAAGTGGATTTTTTAAAAAGCGCTCAAAAAAAGCAAGTCCATTTGTCTTATGAGATCGCTAG
CTATCAATTGAATGAGCGTTTGTTTGAAACGAGCGATTTTGTAGCAATGGGGCGTTATGAAAGAGACGATGCGAGCGTGG
CTAACATTGCCAACCAGCTCAAGGGAACAACCCCTAAAGAAAGCGTTCGTAATTTTTATGCGTTCATCAAGCATGAGATG
CCTAAAAGACAGAAGGCTTTAGAGGGTAAAGAAAATTTGCCTAAGCGAGAGAGTTTGCCTTGGTTTGCAACCATTTCAAA
AGAGAGCATGTTTGTGTCCTTATGCCATGCGTGTGGGATTAAAAGCGCTGAAGTGCAAGGCTTGAAATTGGCTCAAAACA
GCGTGGTGAAAAACGCTTCTAAGGTAGAAGTGTATTTGAAAGATTCATTTCTAGCGTTTGATTTTCAAAATAATCACAAG
GAAGTTTTTATCCCGTTGAATCGTCATAAAGACATGCAGTTAGATTCTGCTTTATTGGCGACTTTTGGCGATGCCTTTGC
CCTTGTAGATGGTAGGGACTTAGGCAATTACGAGAGCAAACTTTTTGAAAAAAGAGTGTCCTATACGATTGTCTAA

Upstream 100 bases:

>100_bases
TTTAGGTTTTTGGATACTTATCAATCCTTTAGGGTTGGTGGTGTGTCCTACTTTTTCATTCATTCAACGAATTTAAAAAT
TACAATAAAGAGTTATACCT

Downstream 100 bases:

>100_bases
AGGCATGAAATTTAGGAATATTCCTTGATAGTGAGCTTTCCTTTTTAAGGAGAGCAAAAAGGGTTTAAAGGGTTGTCTTT
ATGCGAGAATTTTTTAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: KatA Associated Protein

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKRRDFIKTTALGATSAVLGAQILQAEESKGSVAKYKIEAQYSIDFDSAEHTSLFIPMPSVVASNVHLQGNHANYKSMLN
FGVPYLQVDFLKSAQKKQVHLSYEIASYQLNERLFETSDFVAMGRYERDDASVANIANQLKGTTPKESVRNFYAFIKHEM
PKRQKALEGKENLPKRESLPWFATISKESMFVSLCHACGIKSAEVQGLKLAQNSVVKNASKVEVYLKDSFLAFDFQNNHK
EVFIPLNRHKDMQLDSALLATFGDAFALVDGRDLGNYESKLFEKRVSYTIV

Sequences:

>Translated_291_residues
MKRRDFIKTTALGATSAVLGAQILQAEESKGSVAKYKIEAQYSIDFDSAEHTSLFIPMPSVVASNVHLQGNHANYKSMLN
FGVPYLQVDFLKSAQKKQVHLSYEIASYQLNERLFETSDFVAMGRYERDDASVANIANQLKGTTPKESVRNFYAFIKHEM
PKRQKALEGKENLPKRESLPWFATISKESMFVSLCHACGIKSAEVQGLKLAQNSVVKNASKVEVYLKDSFLAFDFQNNHK
EVFIPLNRHKDMQLDSALLATFGDAFALVDGRDLGNYESKLFEKRVSYTIV
>Mature_291_residues
MKRRDFIKTTALGATSAVLGAQILQAEESKGSVAKYKIEAQYSIDFDSAEHTSLFIPMPSVVASNVHLQGNHANYKSMLN
FGVPYLQVDFLKSAQKKQVHLSYEIASYQLNERLFETSDFVAMGRYERDDASVANIANQLKGTTPKESVRNFYAFIKHEM
PKRQKALEGKENLPKRESLPWFATISKESMFVSLCHACGIKSAEVQGLKLAQNSVVKNASKVEVYLKDSFLAFDFQNNHK
EVFIPLNRHKDMQLDSALLATFGDAFALVDGRDLGNYESKLFEKRVSYTIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32770; Mature: 32770

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRDFIKTTALGATSAVLGAQILQAEESKGSVAKYKIEAQYSIDFDSAEHTSLFIPMPS
CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCEEEEECHH
VVASNVHLQGNHANYKSMLNFGVPYLQVDFLKSAQKKQVHLSYEIASYQLNERLFETSDF
HHHCCEEEECCCCCHHHHHHCCCCCEEHHHHHCCCCCEEEEEEEEEHHHHHHHHHHCCCE
VAMGRYERDDASVANIANQLKGTTPKESVRNFYAFIKHEMPKRQKALEGKENLPKRESLP
EEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHCCCCCCCCC
WFATISKESMFVSLCHACGIKSAEVQGLKLAQNSVVKNASKVEVYLKDSFLAFDFQNNHK
EEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCC
EVFIPLNRHKDMQLDSALLATFGDAFALVDGRDLGNYESKLFEKRVSYTIV
EEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCEECC
>Mature Secondary Structure
MKRRDFIKTTALGATSAVLGAQILQAEESKGSVAKYKIEAQYSIDFDSAEHTSLFIPMPS
CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCEEEEECHH
VVASNVHLQGNHANYKSMLNFGVPYLQVDFLKSAQKKQVHLSYEIASYQLNERLFETSDF
HHHCCEEEECCCCCHHHHHHCCCCCEEHHHHHCCCCCEEEEEEEEEHHHHHHHHHHCCCE
VAMGRYERDDASVANIANQLKGTTPKESVRNFYAFIKHEMPKRQKALEGKENLPKRESLP
EEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHCCCCCCCCC
WFATISKESMFVSLCHACGIKSAEVQGLKLAQNSVVKNASKVEVYLKDSFLAFDFQNNHK
EEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCC
EVFIPLNRHKDMQLDSALLATFGDAFALVDGRDLGNYESKLFEKRVSYTIV
EEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA