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The map label for this gene is 188527217

Identifier: 188527217

GI number: 188527217

Start: 403945

End: 405234

Strand: Direct

Name: 188527217

Synonym: HPSH_02120

Alternate gene names: NA

Gene position: 403945-405234 (Clockwise)

Preceding gene: 188527216

Following gene: 188527218

Centisome position: 25.11

GC content: 36.43

Gene sequence:

>1290_bases
GTGTTGAAAGAGCGTTTAAAAGCCTTTTTTAGTGCGGACTCTGTCTTCACTTTAATTTTTGCCCTTTTCTTTCTCACTTC
GTTTAAAAAGCCTTTAACTCAAGTCTTATTGATTGTTTTAATGTTTTTTTTGTTTCTTAGGTGTTATTTCCAAGCGTCTT
TGAAAGAGACCTTTAGAATTAATCATCTAAAAACAATGCCTTTCAAATGGCTTACTCTAGCTTTTTGGGGCGTGTTTTTA
AGCATCTTCCCTAACATGTTTAACATGCATGATAGCCAAACTTTCCGCTACAATTTATTCGCTCTAAACATGTCCTTAAC
TTATGCTTGCGGGGCGTTATGCTTGCTTTTTGCCAGTTGTTTAAGAATCAAATTGAATCAAAAAATCCTTTTTTACAGCA
TGGCTGTTGCCAATTTCATCAACGGCTTGCTTTCATTGGTGCAAAAAATTTATTTTAACATGCCCAGAGCGCAAGGGTTT
AGCACGGTTAAGGAGTATGTGGTTTTAGTGAGTGTTTCCATTTTAGGCTGTTATATTTATGCGCTTTATTCGCGCAATCA
AAAAGAGAAACTTTTTTTCACGCTTTCTGTTTTTGTGGGGTTTTTAGTCGTTATTTTAAGCGCTACAAGGAGCGCGACAA
TCGCTTTTATTATGACTTTTTTAATCCTTTCTTGCTTTATTTTATACGCCAAAAAATCGCTCAAACCATTGGGTTATATG
GTGGTTGTGAGTCTTATTTTGAGCGCTTTGTATATGGGGAGTAACGCTTTAGAAAAAAAGGGGGCAATAGAGCAATCTAG
GGTTCAAAACCAAAGCTTTGAAGAAGATTTGAAACGCTACGCTAAAAAAGACGCTGATAGCAGTATCGGGTGGCGTTTGG
AGCGCTGGAAAGAAGCCCTAACGGTTTTGCGTTTAAGGCCCTTTTTTGGTATGGCTGCTAGCGAGAAATGCCAGAGGTTA
GAAGAGATTTTATCTTTATCGCATTCTTACAGAGCCAAAGATTTGATTCTTTGTTATGAAAGATACGACAATCAAATCAT
TCATGTTCTAGCCACTAGGGGGATCATAGGCTTTTTAATCTGGCTCTTTTTTTTATTAGTCATTGTAAAGATTTTTTGGA
GCGGGATAAAGCAAAACTCTTTAATCTCACTCTTTATATTAACAACGCTCACTTTTTATCTCGTTTTTGGTATTGGGTTT
GACCCCTTTGATTTCTTTATTACGGGAAGTTTTTTTGTAGGAATGGTCATGATGGCTGTTTTTTTAAAAAAGGATAAAAG
CGCTTTTTAG

Upstream 100 bases:

>100_bases
AATACATTAAACGCACCGATCATGCGCGTTATGTGGTTTTGATTGAAAAGTTAGGCATTAAAGACAGATAATTTTATCGG
TTTTAGGGCATGGCGAGTTT

Downstream 100 bases:

>100_bases
CATCAAAGGGTTTAATGCTAGTCAAGCGGTAGTTTCTTGTGATGCGCTCTTATGGGGATTTAAGAGGTAAGATAAAAACT
TATGCTATAATGCGATCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MLKERLKAFFSADSVFTLIFALFFLTSFKKPLTQVLLIVLMFFLFLRCYFQASLKETFRINHLKTMPFKWLTLAFWGVFL
SIFPNMFNMHDSQTFRYNLFALNMSLTYACGALCLLFASCLRIKLNQKILFYSMAVANFINGLLSLVQKIYFNMPRAQGF
STVKEYVVLVSVSILGCYIYALYSRNQKEKLFFTLSVFVGFLVVILSATRSATIAFIMTFLILSCFILYAKKSLKPLGYM
VVVSLILSALYMGSNALEKKGAIEQSRVQNQSFEEDLKRYAKKDADSSIGWRLERWKEALTVLRLRPFFGMAASEKCQRL
EEILSLSHSYRAKDLILCYERYDNQIIHVLATRGIIGFLIWLFFLLVIVKIFWSGIKQNSLISLFILTTLTFYLVFGIGF
DPFDFFITGSFFVGMVMMAVFLKKDKSAF

Sequences:

>Translated_429_residues
MLKERLKAFFSADSVFTLIFALFFLTSFKKPLTQVLLIVLMFFLFLRCYFQASLKETFRINHLKTMPFKWLTLAFWGVFL
SIFPNMFNMHDSQTFRYNLFALNMSLTYACGALCLLFASCLRIKLNQKILFYSMAVANFINGLLSLVQKIYFNMPRAQGF
STVKEYVVLVSVSILGCYIYALYSRNQKEKLFFTLSVFVGFLVVILSATRSATIAFIMTFLILSCFILYAKKSLKPLGYM
VVVSLILSALYMGSNALEKKGAIEQSRVQNQSFEEDLKRYAKKDADSSIGWRLERWKEALTVLRLRPFFGMAASEKCQRL
EEILSLSHSYRAKDLILCYERYDNQIIHVLATRGIIGFLIWLFFLLVIVKIFWSGIKQNSLISLFILTTLTFYLVFGIGF
DPFDFFITGSFFVGMVMMAVFLKKDKSAF
>Mature_429_residues
MLKERLKAFFSADSVFTLIFALFFLTSFKKPLTQVLLIVLMFFLFLRCYFQASLKETFRINHLKTMPFKWLTLAFWGVFL
SIFPNMFNMHDSQTFRYNLFALNMSLTYACGALCLLFASCLRIKLNQKILFYSMAVANFINGLLSLVQKIYFNMPRAQGF
STVKEYVVLVSVSILGCYIYALYSRNQKEKLFFTLSVFVGFLVVILSATRSATIAFIMTFLILSCFILYAKKSLKPLGYM
VVVSLILSALYMGSNALEKKGAIEQSRVQNQSFEEDLKRYAKKDADSSIGWRLERWKEALTVLRLRPFFGMAASEKCQRL
EEILSLSHSYRAKDLILCYERYDNQIIHVLATRGIIGFLIWLFFLLVIVKIFWSGIKQNSLISLFILTTLTFYLVFGIGF
DPFDFFITGSFFVGMVMMAVFLKKDKSAF

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49603; Mature: 49603

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCC
>Mature Secondary Structure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HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA