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The map label for this gene is rt

Identifier: 188990001

GI number:

Start: 682291

End: 683985

Strand: Direct

Name: rt

Synonym: xccb100_0606

Alternate gene names: NA

Gene position: NA

Preceding gene: 188990000

Following gene: 188990002

Centisome position: NA

GC content: NA

Gene sequence:

>1695_bases
ATGCCCCCGCTCCCCGATTATGCATCTACTGAGTTATTGCTGGGCCTCAAGACCCGAAAGGATCTCGCGTCCTGGTTGGG
TGTATCAGATAGAGCTCTACGATATATGCTGTATCGGCTTGGTGATGGGGATAAGTACAGCACCTTCTCGATTCGAAAGC
GGAATGGTGGTTTGCGAGAAATTCATGCGCCTAAAAAGGCGCTAAAATATCTCCAGAATAAAGTTGCACATGCCCTTGCG
GGCGTTGTTCCTGTCCGTCAAATAGCGAAAGGCTATGTGCCTGGTCGAAGCATCTACGACCATGCAAAAATGCATCGATC
CAAGAAGTGGGTCGTTCTTGTTGATCTGAAAAGTTTTTTCCCTTCAATAAATTTTGGACGAGTTCTCGGACTTCTGCGTG
CGCCTCCATTTTCTTTGGAAAATGAAGTGGCGGTCGCTGTTGCTCAGCTGTGTACAAGAGCGGGTGAGCTACCACAAGGG
GCGCCTTCGTCACCGGTTATTTCCAATTTGATTTGCAGAAAACTTGATCGTCAGCTGCTTGAGCTGGCGAAGCAGGCGGG
CTGTGGGGTCAGCAGGTATGCTGATGACATTTGCTTTTCCACGAACCGTAAGCGTGTTTCAGTCGAAATTTGCGATTTCG
TCAATGAGCATGGATGGGTTCCTGGCGCTGGTTTGAAGCAGCTTATTTGCTCCAATGGCTTTGAAATTAATTTTTCGAAA
TTTCGTGTTCACGAGGGGCGCGACAGGAAATTGGTTACTGGGCTCGTGGTTAATAAGGGTGTGTCGACGCCAAGCAGATG
GAGGGATCAACTAAGATCTTCACTTCATGTTATTGATAAGTATGGCGAAGCTGCTGGAGTAGAAATAATTTCTGGCTGGA
CTTCTGGATTTTTTCGTAAAGAGCCTGGGGATGTGCTTCGCACTATTAGAGGGAAGCTTGGCTATCTTAAATGGATTGAT
AAAGTGGCTAATCATTTGGCTACTGATGCGTTGCGCAGAAACTTTCCATCTCTTGCATCATTAATGCCGATTTCAAATGA
TGGTGTTTCATTTAGAATTATGGCAGAAGGTCCGACGGACCTTCTGCATTTGGAGGCTGCGCTCGATTATCTTCGGAAAA
GTGGAGGTTTTCTAGATGTTCGCCCTAGGTTTCAAAATTTCCTCGGAGATGTGGGTGATTCAGAGTTGTGGGAAACTTTG
TTGCGTATTGCGAAAGCTGATGTTAATGAATTGACTATAGGTGTTTTTGATTGCGATAGCCCGGCATTCATGAAGAAGAC
GTCGCTGGTCCCCGGCGGGAACATCCAATTGGGGCCGCGGGTCTACGCATTTTGTTTGGCGCCGCCTGGCACGAGCATTT
CAAATAATTTTTGCATCGAGTCGCTATATTCGCGATCAGATGCAACTTTAGTTGATGGTTCCGGTAGGCGATTATTTTTT
GGTGATGAATTCGATAGTGCCAGTGGTTTTTCGCATGACGGGTTGTATAAGTGCTTGCATCCTAAGAAGAAGGCGATCGT
TGTGAGTGATCAGGTTGCCCGGGTTCACGATGGCGCTTCCGTTCTTTTATCTAAAGCCGGGTTTGCCAGTCAGGTGAAAG
ACAAGGCTCCGCCATTCGATGTGGTGTCTTTTGATGGGTTTAGACCAACCTGGCTTGGGATTCGCGCGTTGGCGATCGCA
GCCGTTAGAAAGTAA

Upstream 100 bases:

>100_bases
ACTTGTGGAGTCAAGAGCATCGCCGCTCAACGTTCCATGATGTCGCTAAATGTAACTGTCAGTCACTCTCAGTAACCTAT
AAGCGTTAAGTTGATGAGCC

Downstream 100 bases:

>100_bases
AGGCGCCACTAACTGGGTTGGAGTAGCGGAATCAGGTTAACTTATCAGGCGATGGCGCTCGGCTTGCGTGGCCGGTGAGC
GGGCCTGCCCCCCGAGCAAA

Product: RNA-directed DNA polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>564_residues
MPPLPDYASTELLLGLKTRKDLASWLGVSDRALRYMLYRLGDGDKYSTFSIRKRNGGLREIHAPKKALKYLQNKVAHALA
GVVPVRQIAKGYVPGRSIYDHAKMHRSKKWVVLVDLKSFFPSINFGRVLGLLRAPPFSLENEVAVAVAQLCTRAGELPQG
APSSPVISNLICRKLDRQLLELAKQAGCGVSRYADDICFSTNRKRVSVEICDFVNEHGWVPGAGLKQLICSNGFEINFSK
FRVHEGRDRKLVTGLVVNKGVSTPSRWRDQLRSSLHVIDKYGEAAGVEIISGWTSGFFRKEPGDVLRTIRGKLGYLKWID
KVANHLATDALRRNFPSLASLMPISNDGVSFRIMAEGPTDLLHLEAALDYLRKSGGFLDVRPRFQNFLGDVGDSELWETL
LRIAKADVNELTIGVFDCDSPAFMKKTSLVPGGNIQLGPRVYAFCLAPPGTSISNNFCIESLYSRSDATLVDGSGRRLFF
GDEFDSASGFSHDGLYKCLHPKKKAIVVSDQVARVHDGASVLLSKAGFASQVKDKAPPFDVVSFDGFRPTWLGIRALAIA
AVRK

Sequences:
NA

Specific function: NA

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA