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The map label for this gene is petA [H]

Identifier: 187928876

GI number: 187928876

Start: 1888639

End: 1889244

Strand: Reverse

Name: petA [H]

Synonym: Rpic_1794

Alternate gene names: 187928876

Gene position: 1889244-1888639 (Counterclockwise)

Preceding gene: 187928877

Following gene: 187928875

Centisome position: 47.92

GC content: 60.89

Gene sequence:

>606_bases
ATGAGCAAGCCAAGCGTTGATTCCCGAACCGTGCGCCAGCGCAGATTGCTTCTGCTGGCCACCGGCACCGTAGGTGGTGT
GGGACTGGCCGGCGCCACGCTGCCATTCGTCGCGAGCATGGCGCCGAGCCGCGCCGCGAGATCGAAGGGAGCCCCAGTCG
AGGTGAACCTCGATTCTGTTGAGCCCGGTGCTCTGGTTACCGTCGCTTGGCGCGGTAAGCCCGTTTGGATTTTGCACCGT
ACCCGCGACATGCTGGATCGTCTAGGCACACACGACAATCTGTTGGGCGATCCGCGATCCAAAGAAGATCAACAGCCGGC
CTATGCACGCAACGCGACACGCTCCCTTCGGCCTGACTACTTTGTGGCAGTAGGCATCTGCACGCATCTTGGCTGCATAC
CGAATTATCGGCCGGAAGTCGGCGCCCCAGATTTGGGCGATCACTGGCCTGGTGGCTTTTTTTGCCCTTGCCATGGTTCC
AAATTCGATCTGGCCGGGCGAGTGTTCCTCAATGTTCCGGCGCCGCTCAACCTGGAGATCCCCCCGTACCAGTACCTGGA
CAACACCCGCCTGATAGTCGGCGAGGATCGCTTTGGAGCCAGATGA

Upstream 100 bases:

>100_bases
GTCAGGCAATGGAAGCAATTGTTCAGCACACTCGCGGACTGATCTGCTCGGTCAAAGCCCCGTGGCTGACCATATCGATC
CCGGCCTGGAGATAACCGCA

Downstream 100 bases:

>100_bases
TTTATTGCCCCGCTGCCTCAGCAGCGGTGGTCCCTACCTCGGTTGTCAAGGAGACGGTCATGAGCACCAAATGGGTGATT
GCCATTGTTCCCACCGAACT

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSKPSVDSRTVRQRRLLLLATGTVGGVGLAGATLPFVASMAPSRAARSKGAPVEVNLDSVEPGALVTVAWRGKPVWILHR
TRDMLDRLGTHDNLLGDPRSKEDQQPAYARNATRSLRPDYFVAVGICTHLGCIPNYRPEVGAPDLGDHWPGGFFCPCHGS
KFDLAGRVFLNVPAPLNLEIPPYQYLDNTRLIVGEDRFGAR

Sequences:

>Translated_201_residues
MSKPSVDSRTVRQRRLLLLATGTVGGVGLAGATLPFVASMAPSRAARSKGAPVEVNLDSVEPGALVTVAWRGKPVWILHR
TRDMLDRLGTHDNLLGDPRSKEDQQPAYARNATRSLRPDYFVAVGICTHLGCIPNYRPEVGAPDLGDHWPGGFFCPCHGS
KFDLAGRVFLNVPAPLNLEIPPYQYLDNTRLIVGEDRFGAR
>Mature_200_residues
SKPSVDSRTVRQRRLLLLATGTVGGVGLAGATLPFVASMAPSRAARSKGAPVEVNLDSVEPGALVTVAWRGKPVWILHRT
RDMLDRLGTHDNLLGDPRSKEDQQPAYARNATRSLRPDYFVAVGICTHLGCIPNYRPEVGAPDLGDHWPGGFFCPCHGSK
FDLAGRVFLNVPAPLNLEIPPYQYLDNTRLIVGEDRFGAR

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=196, Percent_Identity=34.6938775510204, Blast_Score=111, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17540418, Length=147, Percent_Identity=35.3741496598639, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6320811, Length=180, Percent_Identity=38.3333333333333, Blast_Score=112, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24580896, Length=163, Percent_Identity=38.0368098159509, Blast_Score=106, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 21896; Mature: 21765

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPSVDSRTVRQRRLLLLATGTVGGVGLAGATLPFVASMAPSRAARSKGAPVEVNLDSV
CCCCCCCHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEECCCC
EPGALVTVAWRGKPVWILHRTRDMLDRLGTHDNLLGDPRSKEDQQPAYARNATRSLRPDY
CCCEEEEEEECCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCHHCCCCCE
FVAVGICTHLGCIPNYRPEVGAPDLGDHWPGGFFCPCHGSKFDLAGRVFLNVPAPLNLEI
EEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCEECC
PPYQYLDNTRLIVGEDRFGAR
CCHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure 
SKPSVDSRTVRQRRLLLLATGTVGGVGLAGATLPFVASMAPSRAARSKGAPVEVNLDSV
CCCCCCHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEECCCC
EPGALVTVAWRGKPVWILHRTRDMLDRLGTHDNLLGDPRSKEDQQPAYARNATRSLRPDY
CCCEEEEEEECCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCHHCCCCCE
FVAVGICTHLGCIPNYRPEVGAPDLGDHWPGGFFCPCHGSKFDLAGRVFLNVPAPLNLEI
EEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCEECC
PPYQYLDNTRLIVGEDRFGAR
CCHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA