Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010682 |
Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is czcN [H]
Identifier: 187928850
GI number: 187928850
Start: 1865522
End: 1866376
Strand: Reverse
Name: czcN [H]
Synonym: Rpic_1767
Alternate gene names: 187928850
Gene position: 1866376-1865522 (Counterclockwise)
Preceding gene: 187928853
Following gene: 187928849
Centisome position: 47.34
GC content: 58.6
Gene sequence:
>855_bases ATGTCGCAGAAGATGACTGTCAGATTGCCGAGCTATGACACAACCGGATTCGCTGGCCCGGGGGCAAGATTAACAACGTA TTACATTTCGGCAATAAAGCCTGACAACGGAAGGGCAACCTTAGAATGCCGGCCATTAGTGCTCGTTTTCGCGCCAGTGT GTCCACTCGAAGTGCGCGACATTCTCCTCCAGCCCCCGAACCGCATGACCGATTCTTCAATCTCCCCGTCCCAACCCGCT GGTCTCTCGAGGGCGCTGGACAATTTCCTGACACGCCACCGCATCGGCGTTTGGCGTGTTGTCGTAACGTTTGTCCTGGC AAGTCTGGTCTTTGGCCATTCTCGCTGGGACGGTACCTGGGTGTCGCCGCTGCTGCTGACGCTGGGGATGTTGGGGGTGA GCCTGGCCACGGTCGGGCGGCTCTGGTGCGCGTTGTACATTTCCGGGCGCAAGAACAATACCTTGGTGACCTCGGGTCCA TATTCACTGTGTCGCCATCCGCTCTATGTCTGCAACTTGCTAGGCATTATCGGACTAGGGGCGATGACCGAGTCGCTGGC GGTTACCGCAGTCCTGGCGCTCGCATTTGCGCTGATGTACCCGGCTGTCATCCGGACGGAAGACCGCTTTCTGGCTTCCG CCTTCCCGGAATTCGCCGAATACGCACGCCGTACACCAGCGTTCTTTCCCCGTCTGTCGCTGTATAGGGGGGAGTCGACA TGGACGGTCCATGTGTCTTCCTTTCAACGCAATATTGCGGACTCGGTCTGGTTTCTCGGCCTGTCGGTGGTCGTGGAGTC GTTTGATTTGTTCCATGACGCCGGCGTCCTCCGGGCGGTCGTGACGCTTGCCTGA
Upstream 100 bases:
>100_bases CAGCATTAGCGAGATCGGAGAATTCCGAGCTCAATGTGCGGATGATGTCGTTCATTGCGGAGCGTCTCTGGGTGTGTCCT GAAAATGGCCAAGACAGTCT
Downstream 100 bases:
>100_bases TGCGGGCAACTCCGCATACACGTACAGCCATGCACTACGCTCACGTCTCCGATTCTGTTGTCGAGAGCATGCTCGTGATG CTGGTCGGCCTGATCGTCCT
Product: Isoprenylcysteine carboxyl methyltransferase
Products: NA
Alternate protein names: Cation efflux system protein CzcN [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSQKMTVRLPSYDTTGFAGPGARLTTYYISAIKPDNGRATLECRPLVLVFAPVCPLEVRDILLQPPNRMTDSSISPSQPA GLSRALDNFLTRHRIGVWRVVVTFVLASLVFGHSRWDGTWVSPLLLTLGMLGVSLATVGRLWCALYISGRKNNTLVTSGP YSLCRHPLYVCNLLGIIGLGAMTESLAVTAVLALAFALMYPAVIRTEDRFLASAFPEFAEYARRTPAFFPRLSLYRGEST WTVHVSSFQRNIADSVWFLGLSVVVESFDLFHDAGVLRAVVTLA
Sequences:
>Translated_284_residues MSQKMTVRLPSYDTTGFAGPGARLTTYYISAIKPDNGRATLECRPLVLVFAPVCPLEVRDILLQPPNRMTDSSISPSQPA GLSRALDNFLTRHRIGVWRVVVTFVLASLVFGHSRWDGTWVSPLLLTLGMLGVSLATVGRLWCALYISGRKNNTLVTSGP YSLCRHPLYVCNLLGIIGLGAMTESLAVTAVLALAFALMYPAVIRTEDRFLASAFPEFAEYARRTPAFFPRLSLYRGEST WTVHVSSFQRNIADSVWFLGLSVVVESFDLFHDAGVLRAVVTLA >Mature_283_residues SQKMTVRLPSYDTTGFAGPGARLTTYYISAIKPDNGRATLECRPLVLVFAPVCPLEVRDILLQPPNRMTDSSISPSQPAG LSRALDNFLTRHRIGVWRVVVTFVLASLVFGHSRWDGTWVSPLLLTLGMLGVSLATVGRLWCALYISGRKNNTLVTSGPY SLCRHPLYVCNLLGIIGLGAMTESLAVTAVLALAFALMYPAVIRTEDRFLASAFPEFAEYARRTPAFFPRLSLYRGESTW TVHVSSFQRNIADSVWFLGLSVVVESFDLFHDAGVLRAVVTLA
Specific function: Component of the CZC cation-efflux system that confers resistance to cobalt, zinc and cadmium [H]
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.xylosoxydans nccN [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007269 [H]
Pfam domain/function: PF04140 ICMT [H]
EC number: NA
Molecular weight: Translated: 31233; Mature: 31102
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKMTVRLPSYDTTGFAGPGARLTTYYISAIKPDNGRATLECRPLVLVFAPVCPLEVRD CCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCEEEEECCCCCHHHHH ILLQPPNRMTDSSISPSQPAGLSRALDNFLTRHRIGVWRVVVTFVLASLVFGHSRWDGTW HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH VSPLLLTLGMLGVSLATVGRLWCALYISGRKNNTLVTSGPYSLCRHPLYVCNLLGIIGLG HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH AMTESLAVTAVLALAFALMYPAVIRTEDRFLASAFPEFAEYARRTPAFFPRLSLYRGEST HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCE WTVHVSSFQRNIADSVWFLGLSVVVESFDLFHDAGVLRAVVTLA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQKMTVRLPSYDTTGFAGPGARLTTYYISAIKPDNGRATLECRPLVLVFAPVCPLEVRD CCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCEEEEECCCCCHHHHH ILLQPPNRMTDSSISPSQPAGLSRALDNFLTRHRIGVWRVVVTFVLASLVFGHSRWDGTW HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH VSPLLLTLGMLGVSLATVGRLWCALYISGRKNNTLVTSGPYSLCRHPLYVCNLLGIIGLG HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH AMTESLAVTAVLALAFALMYPAVIRTEDRFLASAFPEFAEYARRTPAFFPRLSLYRGEST HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCE WTVHVSSFQRNIADSVWFLGLSVVVESFDLFHDAGVLRAVVTLA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9044283; 7766206 [H]