Click here to switch to the map view.

The map label for this gene is 187927763

Identifier: 187927763

GI number: 187927763

Start: 707023

End: 707814

Strand: Reverse

Name: 187927763

Synonym: Rpic_0667

Alternate gene names: NA

Gene position: 707814-707023 (Counterclockwise)

Preceding gene: 187927764

Following gene: 187927762

Centisome position: 17.95

GC content: 62.75

Gene sequence:

>792_bases
ATGTTGAGCGATAGCGCCAAAGCGGGTGGTTTCTCGATGATGGTGGTGATGCCTGCGATGGCGTTGCTCGGCCTGCTGAC
CATGGCGACCTTCCATCTGGTGTTGGATCAACGGCACCGCACGTCTCTCACGGCCGATCGTGCCTTGGCCAAATACGGCG
CGGAAATGGCGCTGAATGCGGCGGAGTGCGAACTGTCCGTCGCCACCGAAACGCCCACGAACCTCCAATGTATGGCGGCC
TTGCCACGGGAACGTATCGCCGCACTGGATCCGGTTTTGAGACGCGGCTTCCTGCTGGGAACGTGCGGCAACGACGGCTC
GCTTGGGTTATGTCAGCCGCAACCCGACCAATCGCTCTGGACGTTGGCGCGACTGCTTGATGCGACCACCCACGCCGTAG
AGATCGACGCACGCCTCCCAGGCACTCAGCGCATTGCCGGCCGCACTGCGCGGTACGTCATTGAGCCGATTCCCGATCGA
TGGCCCGGCCAAACTCAGCATAGCGATGACACGCCACCGCCATGGTTGTATCGCATCACGGCAGCAGGATTTGGCGCCGA
CCCCGCGGTCAGTGTCGTGCTGCAAACAGTCTTCCGCCCCCGAGTGCCGCGCCATACATCCACGCCTCAGACCACCACCG
AAGCTGCACTGCCCACCATTCGACCCAGTGGCACGGTGACACAACGCGTCTACACCACAAGCGACCGGCACGACGCAACC
GCCCCCCATTCGCAAACCTTCATGCTCGGCCCCCTGAACTGGCGTGAGCTGATCGAGGAGGGCTTACGATGA

Upstream 100 bases:

>100_bases
CACAGGACTTGGAGTTCACGCCAACCGAAACCCAACGCCGTCGTGCCGTTTTCACTGCAACGGTACGCTTGCGCAATCCG
CTCGCCTGCGACGTGGACGT

Downstream 100 bases:

>100_bases
AGTATCGCCATGCCGCATTCACGCTTGTCGAGCTTACGATCGCATTGGCCATCGCTGCGTTATTGACCGGCGCCGCCATA
CAAACCTGGTCGAGACACCA

Product: Tfp pilus assembly protein PilX-like protein

Products: NA

Alternate protein names: Signal Peptide Protein; Type IV Pilus Assembly Protein Pilx; Tfp Pilus Assembly Protein PilX-Like Protein

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MLSDSAKAGGFSMMVVMPAMALLGLLTMATFHLVLDQRHRTSLTADRALAKYGAEMALNAAECELSVATETPTNLQCMAA
LPRERIAALDPVLRRGFLLGTCGNDGSLGLCQPQPDQSLWTLARLLDATTHAVEIDARLPGTQRIAGRTARYVIEPIPDR
WPGQTQHSDDTPPPWLYRITAAGFGADPAVSVVLQTVFRPRVPRHTSTPQTTTEAALPTIRPSGTVTQRVYTTSDRHDAT
APHSQTFMLGPLNWRELIEEGLR

Sequences:

>Translated_263_residues
MLSDSAKAGGFSMMVVMPAMALLGLLTMATFHLVLDQRHRTSLTADRALAKYGAEMALNAAECELSVATETPTNLQCMAA
LPRERIAALDPVLRRGFLLGTCGNDGSLGLCQPQPDQSLWTLARLLDATTHAVEIDARLPGTQRIAGRTARYVIEPIPDR
WPGQTQHSDDTPPPWLYRITAAGFGADPAVSVVLQTVFRPRVPRHTSTPQTTTEAALPTIRPSGTVTQRVYTTSDRHDAT
APHSQTFMLGPLNWRELIEEGLR
>Mature_263_residues
MLSDSAKAGGFSMMVVMPAMALLGLLTMATFHLVLDQRHRTSLTADRALAKYGAEMALNAAECELSVATETPTNLQCMAA
LPRERIAALDPVLRRGFLLGTCGNDGSLGLCQPQPDQSLWTLARLLDATTHAVEIDARLPGTQRIAGRTARYVIEPIPDR
WPGQTQHSDDTPPPWLYRITAAGFGADPAVSVVLQTVFRPRVPRHTSTPQTTTEAALPTIRPSGTVTQRVYTTSDRHDAT
APHSQTFMLGPLNWRELIEEGLR

Specific function: Unknown

COG id: COG4726

COG function: function code NU; Tfp pilus assembly protein PilX

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28648; Mature: 28648

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDSAKAGGFSMMVVMPAMALLGLLTMATFHLVLDQRHRTSLTADRALAKYGAEMALNA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCH
AECELSVATETPTNLQCMAALPRERIAALDPVLRRGFLLGTCGNDGSLGLCQPQPDQSLW
HHCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCHHHH
TLARLLDATTHAVEIDARLPGTQRIAGRTARYVIEPIPDRWPGQTQHSDDTPPPWLYRIT
HHHHHHHHHHHEEEEECCCCCCHHHHCCHHHHEEECCCCCCCCCCCCCCCCCCCEEEEEE
AAGFGADPAVSVVLQTVFRPRVPRHTSTPQTTTEAALPTIRPSGTVTQRVYTTSDRHDAT
ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCC
APHSQTFMLGPLNWRELIEEGLR
CCCCCEEEECCCCHHHHHHHHCC
>Mature Secondary Structure
MLSDSAKAGGFSMMVVMPAMALLGLLTMATFHLVLDQRHRTSLTADRALAKYGAEMALNA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCH
AECELSVATETPTNLQCMAALPRERIAALDPVLRRGFLLGTCGNDGSLGLCQPQPDQSLW
HHCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCHHHH
TLARLLDATTHAVEIDARLPGTQRIAGRTARYVIEPIPDRWPGQTQHSDDTPPPWLYRIT
HHHHHHHHHHHEEEEECCCCCCHHHHCCHHHHEEECCCCCCCCCCCCCCCCCCCEEEEEE
AAGFGADPAVSVVLQTVFRPRVPRHTSTPQTTTEAALPTIRPSGTVTQRVYTTSDRHDAT
ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCC
APHSQTFMLGPLNWRELIEEGLR
CCCCCEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA