Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is acsA1 [H]
Identifier: 187927751
GI number: 187927751
Start: 693591
End: 695645
Strand: Reverse
Name: acsA1 [H]
Synonym: Rpic_0655
Alternate gene names: 187927751
Gene position: 695645-693591 (Counterclockwise)
Preceding gene: 187927752
Following gene: 187927750
Centisome position: 17.64
GC content: 66.42
Gene sequence:
>2055_bases ATGAGCACCATCCAGGAAGGCGCCCTCCTATGGACGCCATCGGCTGACTTCATCGCGCGCTCGCGCCTGACGCATTACCT CGACTGGCTCGCGCGCGAACGCGGGCTGCGCTTTTCGGCGACCACGCCCGAGGGCTACGCACGACTCTGGGAATGGTCGA CCACTGAACTCGAGGCGTTCTGGACGTCCGTCTGGGACTACCTTGACCTGCGCGCCTCGACACCGTTCTCGCAGATGCTG GGCGACCGCACCATGCCCGGCGCGCAATGGCTGGTCGGCGCGAAGCTCAATTACGTCGATCAGGTCATGCGCCATGTGGA AGAAGGCGGCAGCCCCGACCGCACCGCCATCCGATACGCCAGCGAGACCAAGCCGCTCGCCGACTTGTCATGGCGCGAAC TGCGCCAACGCGTTGCCTCGCTGGCGGATGCGCTGCGCAAGATGGGCGTGGTGCCGGGCGACCGCGTCGCCGCATATCTG TCGAACACGCCGGACGCGATCGTGGCGTTTCTCGCCACGGCCAGCGTCGGGGCCATCTGGTCTGTCTGTGCGCCCGACAT GGGCCAGGTGGCCGTGACCGACCGCTTCCGGCAGATCGAGCCCAAAGTGCTGATCGCGTTGGACGGCTATCACTACGGCG GCCGCGCGTTCGACCGCACCGACATCGTCGCAGAGATGGTCGCCGCACTGCCAACTGTCGAACACCTCGTGCTCGTGCCG CAGTTGCTTGGCGAGGTCAACCGCGCGCGCTTCCCGGAGGCCCGCGACTGGTGCGACCTGACTGCGAACGACGTACCACT CGTCGTCACACCCGTCGCCGCCGACCACCCGCTGTGGATTCTCTATTCGTCCGGCACCACCGGCATGCCCAAGCCGATCG TGCACGGCCATGGCGGCCTGCTGCTGGTGCAGACGATGATGGGCGCGCTGCATCTCGACCTTGGCCCCGACGACGTCTAC CACTGGTACAGCAGCACCGGCTGGGTCATGTGGAATTCGCAAGCGAGCGGCTTACTCGGCGGCGTCACGCTCGCCATCTA CGACGGCAACCCCGGCACGCCCGATCTCAATACGCTGTGGCGCTTCGCACAGGATGCGGGCGTGACCTTCTTTGGCGCCG GCGCGGCGTTCTTCGCCAATTGCCTGAAGGCCGGCATCGAGCCCGGGCGCGATTTCGACCTGTCGAGACTGCGTGCGGTC GGCTCGACCGGCTCGCCGCTCTCGGCCGAGGCGTACGACTGGATCTACCGCCACGTAAAAGCCGACGTCTGGCTCAACCC CATTTCCGGCGGCACCGACTTCGCTGGCTGCTTCGTGGGCGGCGTCGCAACACTGCCCGTCTATGCGGGTGAGATGCAAT GCCGCAACCTCGGCTCGCGTGTGGAAGCACTGGACGAGGCTGGCCGACCGCTCATCGACGCGGTAGGCGAGCTGGTCTGC ACCGCGCCCATTCCGTCGATGCCGCTCTTCTTCTGGGGCGACAGCGACGGCAGCCGCTACCGCGACAGCTACTTCGACAT GTACCCCGGCCAGTGGCGCCACGGCGACTGGATCAAGATCACGCCACGCGGCGGCGCCATCATCTACGGCCGGTCGGATG CCACGATCAACCGCCACGGTATCCGCATGGGCACAGCCGAGCTGTACCGCGTAGTGGAAGATCTGCCGGAAGTGCTCGAC AGCCTTGTCGTCGATCTGGAATTCCTCGGCCGCGAATCGTTCATGCCACTGTTCGTCGTGCTGCGCGAAGGTGCGACGCT CGACGACACGCTGCGCAGCACGATCAATGCACGCATCAAGGCAGGGCTGTCGGCCCGGCATGTGCCCAACGTGGTCGTAC AGGCACCCGGCGTGCCGCGCACGCTGTCGGGCAAGAAGATGGAAGTGCCCATCAAGAAACTGCTGCTTGGCGCACCAATC GAGCGCGTCGCCAACCCCGATGCAATGGCAAACCCGGAGGTGCTTGCGTGGTACGCGACCTACGCCGGGTCGCTGGCCCG GCAAAGCAGCGCGCACGGCGAGCCCGCGCCCGCATTGGAATCGTGGCGGAGCTAG
Upstream 100 bases:
>100_bases TGTGCATGGGCGGCATCTGAACCGTCGCCCCCTCTCGGCCGACCCGCCACAACGATAGAGCGGGCGGCCTTTCCCCTTGC CTGACCGGCGGAGGAGACAC
Downstream 100 bases:
>100_bases ACCGATCGTTGGTCTCTGGTTTCACAATCTCCGCCAATCGAACGATGGCAGGGACCGGGTGTGATGACTAACGTACAGCT TGCACCGGCACATCAAGATG
Product: acetoacetyl-CoA synthetase
Products: NA
Alternate protein names: Acetoacetate--CoA ligase 1; Acyl-activating enzyme 1 [H]
Number of amino acids: Translated: 684; Mature: 683
Protein sequence:
>684_residues MSTIQEGALLWTPSADFIARSRLTHYLDWLARERGLRFSATTPEGYARLWEWSTTELEAFWTSVWDYLDLRASTPFSQML GDRTMPGAQWLVGAKLNYVDQVMRHVEEGGSPDRTAIRYASETKPLADLSWRELRQRVASLADALRKMGVVPGDRVAAYL SNTPDAIVAFLATASVGAIWSVCAPDMGQVAVTDRFRQIEPKVLIALDGYHYGGRAFDRTDIVAEMVAALPTVEHLVLVP QLLGEVNRARFPEARDWCDLTANDVPLVVTPVAADHPLWILYSSGTTGMPKPIVHGHGGLLLVQTMMGALHLDLGPDDVY HWYSSTGWVMWNSQASGLLGGVTLAIYDGNPGTPDLNTLWRFAQDAGVTFFGAGAAFFANCLKAGIEPGRDFDLSRLRAV GSTGSPLSAEAYDWIYRHVKADVWLNPISGGTDFAGCFVGGVATLPVYAGEMQCRNLGSRVEALDEAGRPLIDAVGELVC TAPIPSMPLFFWGDSDGSRYRDSYFDMYPGQWRHGDWIKITPRGGAIIYGRSDATINRHGIRMGTAELYRVVEDLPEVLD SLVVDLEFLGRESFMPLFVVLREGATLDDTLRSTINARIKAGLSARHVPNVVVQAPGVPRTLSGKKMEVPIKKLLLGAPI ERVANPDAMANPEVLAWYATYAGSLARQSSAHGEPAPALESWRS
Sequences:
>Translated_684_residues MSTIQEGALLWTPSADFIARSRLTHYLDWLARERGLRFSATTPEGYARLWEWSTTELEAFWTSVWDYLDLRASTPFSQML GDRTMPGAQWLVGAKLNYVDQVMRHVEEGGSPDRTAIRYASETKPLADLSWRELRQRVASLADALRKMGVVPGDRVAAYL SNTPDAIVAFLATASVGAIWSVCAPDMGQVAVTDRFRQIEPKVLIALDGYHYGGRAFDRTDIVAEMVAALPTVEHLVLVP QLLGEVNRARFPEARDWCDLTANDVPLVVTPVAADHPLWILYSSGTTGMPKPIVHGHGGLLLVQTMMGALHLDLGPDDVY HWYSSTGWVMWNSQASGLLGGVTLAIYDGNPGTPDLNTLWRFAQDAGVTFFGAGAAFFANCLKAGIEPGRDFDLSRLRAV GSTGSPLSAEAYDWIYRHVKADVWLNPISGGTDFAGCFVGGVATLPVYAGEMQCRNLGSRVEALDEAGRPLIDAVGELVC TAPIPSMPLFFWGDSDGSRYRDSYFDMYPGQWRHGDWIKITPRGGAIIYGRSDATINRHGIRMGTAELYRVVEDLPEVLD SLVVDLEFLGRESFMPLFVVLREGATLDDTLRSTINARIKAGLSARHVPNVVVQAPGVPRTLSGKKMEVPIKKLLLGAPI ERVANPDAMANPEVLAWYATYAGSLARQSSAHGEPAPALESWRS >Mature_683_residues STIQEGALLWTPSADFIARSRLTHYLDWLARERGLRFSATTPEGYARLWEWSTTELEAFWTSVWDYLDLRASTPFSQMLG DRTMPGAQWLVGAKLNYVDQVMRHVEEGGSPDRTAIRYASETKPLADLSWRELRQRVASLADALRKMGVVPGDRVAAYLS NTPDAIVAFLATASVGAIWSVCAPDMGQVAVTDRFRQIEPKVLIALDGYHYGGRAFDRTDIVAEMVAALPTVEHLVLVPQ LLGEVNRARFPEARDWCDLTANDVPLVVTPVAADHPLWILYSSGTTGMPKPIVHGHGGLLLVQTMMGALHLDLGPDDVYH WYSSTGWVMWNSQASGLLGGVTLAIYDGNPGTPDLNTLWRFAQDAGVTFFGAGAAFFANCLKAGIEPGRDFDLSRLRAVG STGSPLSAEAYDWIYRHVKADVWLNPISGGTDFAGCFVGGVATLPVYAGEMQCRNLGSRVEALDEAGRPLIDAVGELVCT APIPSMPLFFWGDSDGSRYRDSYFDMYPGQWRHGDWIKITPRGGAIIYGRSDATINRHGIRMGTAELYRVVEDLPEVLDS LVVDLEFLGRESFMPLFVVLREGATLDDTLRSTINARIKAGLSARHVPNVVVQAPGVPRTLSGKKMEVPIKKLLLGAPIE RVANPDAMANPEVLAWYATYAGSLARQSSAHGEPAPALESWRS
Specific function: Involved in poly-3-hydroxybutyrate degradation. Activates acetoacetate to acetoacetyl-CoA [H]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI31982927, Length=668, Percent_Identity=37.125748502994, Blast_Score=460, Evalue=1e-129, Organism=Homo sapiens, GI28416953, Length=653, Percent_Identity=27.5650842266462, Blast_Score=212, Evalue=8e-55, Organism=Homo sapiens, GI8923896, Length=638, Percent_Identity=25.3918495297806, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI253970489, Length=651, Percent_Identity=25.0384024577573, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI13375727, Length=615, Percent_Identity=27.3170731707317, Blast_Score=162, Evalue=1e-39, Organism=Escherichia coli, GI1790505, Length=646, Percent_Identity=26.4705882352941, Blast_Score=187, Evalue=2e-48, Organism=Escherichia coli, GI1786529, Length=610, Percent_Identity=25.7377049180328, Blast_Score=143, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17569507, Length=630, Percent_Identity=33.8095238095238, Blast_Score=389, Evalue=1e-108, Organism=Caenorhabditis elegans, GI71983001, Length=626, Percent_Identity=25.8785942492013, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI71982997, Length=626, Percent_Identity=25.8785942492013, Blast_Score=152, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6323182, Length=650, Percent_Identity=28.3076923076923, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6319264, Length=642, Percent_Identity=26.3239875389408, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI24667955, Length=641, Percent_Identity=25.1170046801872, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI62472339, Length=547, Percent_Identity=26.3254113345521, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI24667959, Length=508, Percent_Identity=25.7874015748031, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI21355225, Length=632, Percent_Identity=25.7911392405063, Blast_Score=157, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005914 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.16 [H]
Molecular weight: Translated: 74927; Mature: 74796
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIQEGALLWTPSADFIARSRLTHYLDWLARERGLRFSATTPEGYARLWEWSTTELEAF CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCHHHHHH WTSVWDYLDLRASTPFSQMLGDRTMPGAQWLVGAKLNYVDQVMRHVEEGGSPDRTAIRYA HHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHEEEC SETKPLADLSWRELRQRVASLADALRKMGVVPGDRVAAYLSNTPDAIVAFLATASVGAIW CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH SVCAPDMGQVAVTDRFRQIEPKVLIALDGYHYGGRAFDRTDIVAEMVAALPTVEHLVLVP HHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH QLLGEVNRARFPEARDWCDLTANDVPLVVTPVAADHPLWILYSSGTTGMPKPIVHGHGGL HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCEEECCCCH LLVQTMMGALHLDLGPDDVYHWYSSTGWVMWNSQASGLLGGVTLAIYDGNPGTPDLNTLW HHHHHHHHHEEECCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHH RFAQDAGVTFFGAGAAFFANCLKAGIEPGRDFDLSRLRAVGSTGSPLSAEAYDWIYRHVK HHHHHCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH ADVWLNPISGGTDFAGCFVGGVATLPVYAGEMQCRNLGSRVEALDEAGRPLIDAVGELVC HCEEEECCCCCCCHHHHHHCCHHHHCEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEE TAPIPSMPLFFWGDSDGSRYRDSYFDMYPGQWRHGDWIKITPRGGAIIYGRSDATINRHG CCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCEEECCC IRMGTAELYRVVEDLPEVLDSLVVDLEFLGRESFMPLFVVLREGATLDDTLRSTINARIK CEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH AGLSARHVPNVVVQAPGVPRTLSGKKMEVPIKKLLLGAPIERVANPDAMANPEVLAWYAT CCCCCCCCCCEEEECCCCCCCCCCCEEECCHHHHHHCCCHHHHCCCCCCCCCCEEEEHHH YAGSLARQSSAHGEPAPALESWRS HHHHHHHHCCCCCCCCCHHHHCCC >Mature Secondary Structure STIQEGALLWTPSADFIARSRLTHYLDWLARERGLRFSATTPEGYARLWEWSTTELEAF CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCHHHHHH WTSVWDYLDLRASTPFSQMLGDRTMPGAQWLVGAKLNYVDQVMRHVEEGGSPDRTAIRYA HHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHEEEC SETKPLADLSWRELRQRVASLADALRKMGVVPGDRVAAYLSNTPDAIVAFLATASVGAIW CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH SVCAPDMGQVAVTDRFRQIEPKVLIALDGYHYGGRAFDRTDIVAEMVAALPTVEHLVLVP HHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH QLLGEVNRARFPEARDWCDLTANDVPLVVTPVAADHPLWILYSSGTTGMPKPIVHGHGGL HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCEEECCCCH LLVQTMMGALHLDLGPDDVYHWYSSTGWVMWNSQASGLLGGVTLAIYDGNPGTPDLNTLW HHHHHHHHHEEECCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHH RFAQDAGVTFFGAGAAFFANCLKAGIEPGRDFDLSRLRAVGSTGSPLSAEAYDWIYRHVK HHHHHCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH ADVWLNPISGGTDFAGCFVGGVATLPVYAGEMQCRNLGSRVEALDEAGRPLIDAVGELVC HCEEEECCCCCCCHHHHHHCCHHHHCEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEE TAPIPSMPLFFWGDSDGSRYRDSYFDMYPGQWRHGDWIKITPRGGAIIYGRSDATINRHG CCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCEEECCC IRMGTAELYRVVEDLPEVLDSLVVDLEFLGRESFMPLFVVLREGATLDDTLRSTINARIK CEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH AGLSARHVPNVVVQAPGVPRTLSGKKMEVPIKKLLLGAPIERVANPDAMANPEVLAWYAT CCCCCCCCCCEEEECCCCCCCCCCCEEECCHHHHHHCCCHHHHCCCCCCCCCCEEEEHHH YAGSLARQSSAHGEPAPALESWRS HHHHHHHHCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10735852; 11481430 [H]