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The map label for this gene is lemA [H]

Identifier: 187927703

GI number: 187927703

Start: 643551

End: 644177

Strand: Reverse

Name: lemA [H]

Synonym: Rpic_0607

Alternate gene names: 187927703

Gene position: 644177-643551 (Counterclockwise)

Preceding gene: 187927704

Following gene: 187927702

Centisome position: 16.34

GC content: 61.56

Gene sequence:

>627_bases
ATGACCCCTGCCCTGACCTTCCGCTCGACGCGTTTTTCGGTGCTGCGCTGGCTGGCGCTGTCGTTGGCCGTGCTGGCTGC
GCCATTCCTGTCTGCGTGCGGCTATAACGATTTCCAGGCGAAGGATGAGGCCACCAAGGCTGCCTGGGCCGAGGTGGTCA
ACCAGTACCAGCGCCGTGCGGACCTGATTCCCAACCTGGTGAATACGGTCAAGGGCTATGCCTCGCACGAGAAGGACACG
CTGGAAGCGGTGACCAAGGCCCGGGCCGCAGCCACCAGCTTCCAGATCACGCCGGAGGTGCTGAACGATCCAGCGGCGTT
CCAGAAATTCCAGCAGGTGCAGGGCGAGCTTTCGAGCGCGCTGTCGCGCCTGATGGCCGTGTCGGAGAACTACCCTCAAC
TCAAGGCTGACCAGTCGTTCCGTGATCTGCAATCGCAACTGGAAGGCACCGAGAACCGCATCACCGTGGCGCGTCAGCGT
TACATCAAATCGGTGCAGGACTACAACGTGCTGACCCGTAGCTTCCCGACCAACCTGACCGCCAAGGTGATGGGCTACCA
GGTCAAGCCGAACTTCACGGTCGAGAACGAAAAGGGTATTTCCACCGCCCCGGCGGTGAAGTTCTGA

Upstream 100 bases:

>100_bases
GACTGGAGCGTCAAGCGCATAAGCTACAGTGCGCTGAAACGTCATGCGACGACGTCGGTCTCATGCCACATTCTTTTCAG
ATTCAGATCTTGAGGACTTC

Downstream 100 bases:

>100_bases
CGAGCTAACGATCATGTCGATGCGCGCGCGTGCCTGCTTCACCCTCTTGCTGACTGTGGCGCTGTGGCTGGCCACTGCGT
TGCCTGCGCGCGCGCAAAGC

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTPALTFRSTRFSVLRWLALSLAVLAAPFLSACGYNDFQAKDEATKAAWAEVVNQYQRRADLIPNLVNTVKGYASHEKDT
LEAVTKARAAATSFQITPEVLNDPAAFQKFQQVQGELSSALSRLMAVSENYPQLKADQSFRDLQSQLEGTENRITVARQR
YIKSVQDYNVLTRSFPTNLTAKVMGYQVKPNFTVENEKGISTAPAVKF

Sequences:

>Translated_208_residues
MTPALTFRSTRFSVLRWLALSLAVLAAPFLSACGYNDFQAKDEATKAAWAEVVNQYQRRADLIPNLVNTVKGYASHEKDT
LEAVTKARAAATSFQITPEVLNDPAAFQKFQQVQGELSSALSRLMAVSENYPQLKADQSFRDLQSQLEGTENRITVARQR
YIKSVQDYNVLTRSFPTNLTAKVMGYQVKPNFTVENEKGISTAPAVKF
>Mature_207_residues
TPALTFRSTRFSVLRWLALSLAVLAAPFLSACGYNDFQAKDEATKAAWAEVVNQYQRRADLIPNLVNTVKGYASHEKDTL
EAVTKARAAATSFQITPEVLNDPAAFQKFQQVQGELSSALSRLMAVSENYPQLKADQSFRDLQSQLEGTENRITVARQRY
IKSVQDYNVLTRSFPTNLTAKVMGYQVKPNFTVENEKGISTAPAVKF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 23176; Mature: 23045

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPALTFRSTRFSVLRWLALSLAVLAAPFLSACGYNDFQAKDEATKAAWAEVVNQYQRRA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DLIPNLVNTVKGYASHEKDTLEAVTKARAAATSFQITPEVLNDPAAFQKFQQVQGELSSA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHH
LSRLMAVSENYPQLKADQSFRDLQSQLEGTENRITVARQRYIKSVQDYNVLTRSFPTNLT
HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AKVMGYQVKPNFTVENEKGISTAPAVKF
HHHHCEEECCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TPALTFRSTRFSVLRWLALSLAVLAAPFLSACGYNDFQAKDEATKAAWAEVVNQYQRRA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DLIPNLVNTVKGYASHEKDTLEAVTKARAAATSFQITPEVLNDPAAFQKFQQVQGELSSA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHH
LSRLMAVSENYPQLKADQSFRDLQSQLEGTENRITVARQRYIKSVQDYNVLTRSFPTNLT
HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AKVMGYQVKPNFTVENEKGISTAPAVKF
HHHHCEEECCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]