Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is ygcG [H]
Identifier: 187927702
GI number: 187927702
Start: 642674
End: 643537
Strand: Reverse
Name: ygcG [H]
Synonym: Rpic_0606
Alternate gene names: 187927702
Gene position: 643537-642674 (Counterclockwise)
Preceding gene: 187927703
Following gene: 187927701
Centisome position: 16.32
GC content: 69.21
Gene sequence:
>864_bases ATGTCGATGCGCGCGCGTGCCTGCTTCACCCTCTTGCTGACTGTGGCGCTGTGGCTGGCCACTGCGTTGCCTGCGCGCGC GCAAAGCGACATGGTGGCCGTGCCGCCGCTGGCCGCGCGCGTGACCGACCTGACCGGCACGCTCAGCGCCGAGCAGAAGA GCGCGCTCGAGCAGGTGCTGGCCGACTACGAGCAGCAGCGCGGCAGCCAGATCTTTGTGCTGATGGTGCCGTCCACCGCG CCGGAACCCATCGAGGCGTACGGCATCCGCGTGGCCGATGCGTGGAAGGCTGGCCGCAAGGGCGTGGACGACGGCGCGAT CATCCTCATCGCCAAGGACAACCCGGCATCGCTGCGCAAGATGCGTATAGAGGTGGGGCGCGGGCTGGAAGGTGCGCTGA CGGACGCGCAATCAAAGCGTGTCCTGCAGGACGTGATGGCGCCGCACTTCCGCCAGGGCGATTTCTACGGCGGGCTGTCG GCAGGTATCTCGGCCATCCAGACCGTCATTGCACTAGAGAGCCTGCCGCCGGCCGAGCGCGCCAAGCGTCAGCAATCCGG CGGCGGCATCGGTGATTGGCTGCCCGTGCTGTTTCCGCTGGCGATCATTGTGTTCTTCGTGCTCAGCGCGGCCATGCGCT CAGGCGGACGTGTGACGGGCAGCCTGCCCGGCCGCCCCGGCTCGCGCGTGGTAATGGGCAATCGCGGCTGGGGCCCCGGC ACCATCGGTGGCTTGGGCGGTGGATTGGGTGGCGGCTGGGGACGCGGCGGCGGTGATTTCGGTGGCGGCGGCGGTGGAGG CGGCGGTTTTAGCGGCGGGGGTGGTGGTGATTTCGGTGGCGGTGGCGCCTCCGGCAACTGGTAA
Upstream 100 bases:
>100_bases GCCAAGGTGATGGGCTACCAGGTCAAGCCGAACTTCACGGTCGAGAACGAAAAGGGTATTTCCACCGCCCCGGCGGTGAA GTTCTGACGAGCTAACGATC
Downstream 100 bases:
>100_bases CCGGTGAACGCATCCATGGCTTCCACGACCCGACATCACCACGGCGCGCGCCGTGCCCTGACCCATCTGCTGACAACCTC GTCGCATGCAAGGCGGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSMRARACFTLLLTVALWLATALPARAQSDMVAVPPLAARVTDLTGTLSAEQKSALEQVLADYEQQRGSQIFVLMVPSTA PEPIEAYGIRVADAWKAGRKGVDDGAIILIAKDNPASLRKMRIEVGRGLEGALTDAQSKRVLQDVMAPHFRQGDFYGGLS AGISAIQTVIALESLPPAERAKRQQSGGGIGDWLPVLFPLAIIVFFVLSAAMRSGGRVTGSLPGRPGSRVVMGNRGWGPG TIGGLGGGLGGGWGRGGGDFGGGGGGGGGFSGGGGGDFGGGGASGNW
Sequences:
>Translated_287_residues MSMRARACFTLLLTVALWLATALPARAQSDMVAVPPLAARVTDLTGTLSAEQKSALEQVLADYEQQRGSQIFVLMVPSTA PEPIEAYGIRVADAWKAGRKGVDDGAIILIAKDNPASLRKMRIEVGRGLEGALTDAQSKRVLQDVMAPHFRQGDFYGGLS AGISAIQTVIALESLPPAERAKRQQSGGGIGDWLPVLFPLAIIVFFVLSAAMRSGGRVTGSLPGRPGSRVVMGNRGWGPG TIGGLGGGLGGGWGRGGGDFGGGGGGGGGFSGGGGGDFGGGGASGNW >Mature_286_residues SMRARACFTLLLTVALWLATALPARAQSDMVAVPPLAARVTDLTGTLSAEQKSALEQVLADYEQQRGSQIFVLMVPSTAP EPIEAYGIRVADAWKAGRKGVDDGAIILIAKDNPASLRKMRIEVGRGLEGALTDAQSKRVLQDVMAPHFRQGDFYGGLSA GISAIQTVIALESLPPAERAKRQQSGGGIGDWLPVLFPLAIIVFFVLSAAMRSGGRVTGSLPGRPGSRVVMGNRGWGPGT IGGLGGGLGGGWGRGGGDFGGGGGGGGGFSGGGGGDFGGGGASGNW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=197, Percent_Identity=29.9492385786802, Blast_Score=95, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 29203; Mature: 29072
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMRARACFTLLLTVALWLATALPARAQSDMVAVPPLAARVTDLTGTLSAEQKSALEQVL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHH ADYEQQRGSQIFVLMVPSTAPEPIEAYGIRVADAWKAGRKGVDDGAIILIAKDNPASLRK HHHHHCCCCEEEEEECCCCCCCCHHHHCCEEHHHHHHCCCCCCCCEEEEEECCCHHHHHH MRIEVGRGLEGALTDAQSKRVLQDVMAPHFRQGDFYGGLSAGISAIQTVIALESLPPAER HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH AKRQQSGGGIGDWLPVLFPLAIIVFFVLSAAMRSGGRVTGSLPGRPGSRVVMGNRGWGPG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCC TIGGLGGGLGGGWGRGGGDFGGGGGGGGGFSGGGGGDFGGGGASGNW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SMRARACFTLLLTVALWLATALPARAQSDMVAVPPLAARVTDLTGTLSAEQKSALEQVL CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHH ADYEQQRGSQIFVLMVPSTAPEPIEAYGIRVADAWKAGRKGVDDGAIILIAKDNPASLRK HHHHHCCCCEEEEEECCCCCCCCHHHHCCEEHHHHHHCCCCCCCCEEEEEECCCHHHHHH MRIEVGRGLEGALTDAQSKRVLQDVMAPHFRQGDFYGGLSAGISAIQTVIALESLPPAER HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH AKRQQSGGGIGDWLPVLFPLAIIVFFVLSAAMRSGGRVTGSLPGRPGSRVVMGNRGWGPG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCC TIGGLGGGLGGGWGRGGGDFGGGGGGGGGFSGGGGGDFGGGGASGNW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]