Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927701
Identifier: 187927701
GI number: 187927701
Start: 642134
End: 642658
Strand: Reverse
Name: 187927701
Synonym: Rpic_0605
Alternate gene names: NA
Gene position: 642658-642134 (Counterclockwise)
Preceding gene: 187927702
Following gene: 187927700
Centisome position: 16.3
GC content: 68.19
Gene sequence:
>525_bases ATGGCTTCCACGACCCGACATCACCACGGCGCGCGCCGTGCCCTGACCCATCTGCTGACAACCTCGTCGCATGCAAGGCG GGCGTTTCCGCCGGCGGATCTGCAAAAGCTTGAAGCCGCCGTGCGCGAAGGCGAACAACACCATCGCGGCGAAGTGCGCG TCGTCATCGAGAGCTCGTTGCCCGTGCGCGACGCCTGGGCCGGGATGTCGCCGCGGCACCGTGCCCGGACGTTGTTCGGG CTGCTGGAGGTGTGGAACACGCGCGAGCACGTGGGCGTGCTGCTCTACATCAACCTGGCCGATCACGCGGTCGAGATCCT GGCCGACCACGGTATCGCCGCCAAGGTGGACGCACACGCGTGGCGCACCATCTGCGCGACCATCACGCGTGGCTTTGCGC AGCGCGTGACCATGGCGCCGGTGCTCGACGCGCTGGCGCAGATCAACGACCTCCTCGCCGCGCACGTGCCTTCCGATGGC ACGCCGCGCACCAATGAGCTGAGCGACCGGCCGGTCGTGCTGTAA
Upstream 100 bases:
>100_bases CGGTGGCGGCGGCGGTGGAGGCGGCGGTTTTAGCGGCGGGGGTGGTGGTGATTTCGGTGGCGGTGGCGCCTCCGGCAACT GGTAACCGGTGAACGCATCC
Downstream 100 bases:
>100_bases CGGCGCTACGTTGAGTGAGGCTGCCAAGCAGCGTCCCAAGCCCGGGGCTGCCGCCACATCCGTCGCCTTGTTTCGCCAGA GATCCGACTGCAGGTGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MASTTRHHHGARRALTHLLTTSSHARRAFPPADLQKLEAAVREGEQHHRGEVRVVIESSLPVRDAWAGMSPRHRARTLFG LLEVWNTREHVGVLLYINLADHAVEILADHGIAAKVDAHAWRTICATITRGFAQRVTMAPVLDALAQINDLLAAHVPSDG TPRTNELSDRPVVL
Sequences:
>Translated_174_residues MASTTRHHHGARRALTHLLTTSSHARRAFPPADLQKLEAAVREGEQHHRGEVRVVIESSLPVRDAWAGMSPRHRARTLFG LLEVWNTREHVGVLLYINLADHAVEILADHGIAAKVDAHAWRTICATITRGFAQRVTMAPVLDALAQINDLLAAHVPSDG TPRTNELSDRPVVL >Mature_173_residues ASTTRHHHGARRALTHLLTTSSHARRAFPPADLQKLEAAVREGEQHHRGEVRVVIESSLPVRDAWAGMSPRHRARTLFGL LEVWNTREHVGVLLYINLADHAVEILADHGIAAKVDAHAWRTICATITRGFAQRVTMAPVLDALAQINDLLAAHVPSDGT PRTNELSDRPVVL
Specific function: Unknown
COG id: COG3762
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19203; Mature: 19072
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTTRHHHGARRALTHLLTTSSHARRAFPPADLQKLEAAVREGEQHHRGEVRVVIESSL CCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHCCHHCCCCCEEEEEECCC PVRDAWAGMSPRHRARTLFGLLEVWNTREHVGVLLYINLADHAVEILADHGIAAKVDAHA CCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHCCCEEEEHHHH WRTICATITRGFAQRVTMAPVLDALAQINDLLAAHVPSDGTPRTNELSDRPVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASTTRHHHGARRALTHLLTTSSHARRAFPPADLQKLEAAVREGEQHHRGEVRVVIESSL CCCCCHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHCCHHCCCCCEEEEEECCC PVRDAWAGMSPRHRARTLFGLLEVWNTREHVGVLLYINLADHAVEILADHGIAAKVDAHA CCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHCCCEEEEHHHH WRTICATITRGFAQRVTMAPVLDALAQINDLLAAHVPSDGTPRTNELSDRPVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA