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The map label for this gene is 187927602

Identifier: 187927602

GI number: 187927602

Start: 536796

End: 537710

Strand: Reverse

Name: 187927602

Synonym: Rpic_0502

Alternate gene names: NA

Gene position: 537710-536796 (Counterclockwise)

Preceding gene: 187927606

Following gene: 187927601

Centisome position: 13.64

GC content: 64.26

Gene sequence:

>915_bases
ATGCCCCGCGTGATCTGGAAGGGCGCCGTGAGCTTCGGCCTCGTCCATATTCCCGTCGCGCTGTATCCGGCCACCCGCAG
CGACGACCTCGACTTCGACTGGCTCGACCGCCGCACCATGGACCGCGTCGGCTACAAGCGCATCAACAAGACCACCGGCA
AAGAAGTGCCGCGCGAGCAGATCGTGCGCGGGTATGCCTACGAGAAAGACCGCTACGTGATCCTGACCGACGAGGACATC
CGGGCCGCTAACCCGGCCTCGACGCAAACGGTCGATTTGCTGACCTTCGTGGATGCGGCGGAGATTCCGTTTCTGTATCT
CGATACGCCGTACTTTCTTGCGCCCGACCGGCGCGGCGAAAAAGTCTACGCGCTGCTGCGCGAGGCATTGACGCGCTCGC
AGAAGATTGGCGTCGCCAACGTCGTGCTGCACACCAAGCAGCATCTGGCCGCACTGATCCCGATGGGGCCTGTGCTCGTG
CTGCATACGCTGCGCTGGTCCAACGAAGTGCGCGACTGGTCCGAACTCGATGTACCAGAAGAAGGGGCCAAGGCCGCCAA
GCTCACGGCCAAGGAGATCGACATGGCTGAAAAGCTGATCGACGACATGAGCGGCACGTGGGACCCTGCCGAGTACCACG
ACACCTTCCGCGACGACATCCTGGCATTGGTCGATCGCAAGGTGCGCGAAGGCCGCACGGAGTCCGTCGAGCCGATGGAG
GCCGAAACCGCTGCACCGCGCTCCGGCAACGTGATCGACCTGACCGACCTGCTGCGCCAGAGCCTCGCCAAGCGTGGCGA
GGGCAAAGATGCCTCCAACGACAAAGCGCAGGAAGAGCCTGCCCCGCGCAAGCGGGCACCCCGCAAAGCCGCCTCCAAGA
CGGCGCGCAAGACCACCACGCGCAAGCGCGCATAA

Upstream 100 bases:

>100_bases
GCTACCGCGCCCGGCTGATGAACGTATGACGCCGCCCTGCGCCAGGCAGGTATGCGGCTTGCGTCACCACGCTCGCAACC
ACCGCATCGGGAGACCTGCC

Downstream 100 bases:

>100_bases
CACGACGGAGCCGACGCCGTGCCACGCCATCTCGCCGACTACCGCAGCAAGCGCGATTTCACGCAGACCCAGGAACCCGC
CGGCGCGCGCCGCAAAGCCG

Product: Ku protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MPRVIWKGAVSFGLVHIPVALYPATRSDDLDFDWLDRRTMDRVGYKRINKTTGKEVPREQIVRGYAYEKDRYVILTDEDI
RAANPASTQTVDLLTFVDAAEIPFLYLDTPYFLAPDRRGEKVYALLREALTRSQKIGVANVVLHTKQHLAALIPMGPVLV
LHTLRWSNEVRDWSELDVPEEGAKAAKLTAKEIDMAEKLIDDMSGTWDPAEYHDTFRDDILALVDRKVREGRTESVEPME
AETAAPRSGNVIDLTDLLRQSLAKRGEGKDASNDKAQEEPAPRKRAPRKAASKTARKTTTRKRA

Sequences:

>Translated_304_residues
MPRVIWKGAVSFGLVHIPVALYPATRSDDLDFDWLDRRTMDRVGYKRINKTTGKEVPREQIVRGYAYEKDRYVILTDEDI
RAANPASTQTVDLLTFVDAAEIPFLYLDTPYFLAPDRRGEKVYALLREALTRSQKIGVANVVLHTKQHLAALIPMGPVLV
LHTLRWSNEVRDWSELDVPEEGAKAAKLTAKEIDMAEKLIDDMSGTWDPAEYHDTFRDDILALVDRKVREGRTESVEPME
AETAAPRSGNVIDLTDLLRQSLAKRGEGKDASNDKAQEEPAPRKRAPRKAASKTARKTTTRKRA
>Mature_303_residues
PRVIWKGAVSFGLVHIPVALYPATRSDDLDFDWLDRRTMDRVGYKRINKTTGKEVPREQIVRGYAYEKDRYVILTDEDIR
AANPASTQTVDLLTFVDAAEIPFLYLDTPYFLAPDRRGEKVYALLREALTRSQKIGVANVVLHTKQHLAALIPMGPVLVL
HTLRWSNEVRDWSELDVPEEGAKAAKLTAKEIDMAEKLIDDMSGTWDPAEYHDTFRDDILALVDRKVREGRTESVEPMEA
ETAAPRSGNVIDLTDLLRQSLAKRGEGKDASNDKAQEEPAPRKRAPRKAASKTARKTTTRKRA

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 34352; Mature: 34221

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVIWKGAVSFGLVHIPVALYPATRSDDLDFDWLDRRTMDRVGYKRINKTTGKEVPREQ
CCCCEEHHHHHHHHEEECEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IVRGYAYEKDRYVILTDEDIRAANPASTQTVDLLTFVDAAEIPFLYLDTPYFLAPDRRGE
HHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCEEECCCCCCH
KVYALLREALTRSQKIGVANVVLHTKQHLAALIPMGPVLVLHTLRWSNEVRDWSELDVPE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCC
EGAKAAKLTAKEIDMAEKLIDDMSGTWDPAEYHDTFRDDILALVDRKVREGRTESVEPME
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AETAAPRSGNVIDLTDLLRQSLAKRGEGKDASNDKAQEEPAPRKRAPRKAASKTARKTTT
HHHCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH
RKRA
HCCC
>Mature Secondary Structure 
PRVIWKGAVSFGLVHIPVALYPATRSDDLDFDWLDRRTMDRVGYKRINKTTGKEVPREQ
CCCEEHHHHHHHHEEECEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IVRGYAYEKDRYVILTDEDIRAANPASTQTVDLLTFVDAAEIPFLYLDTPYFLAPDRRGE
HHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCEEECCCCCCH
KVYALLREALTRSQKIGVANVVLHTKQHLAALIPMGPVLVLHTLRWSNEVRDWSELDVPE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCC
EGAKAAKLTAKEIDMAEKLIDDMSGTWDPAEYHDTFRDDILALVDRKVREGRTESVEPME
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AETAAPRSGNVIDLTDLLRQSLAKRGEGKDASNDKAQEEPAPRKRAPRKAASKTARKTTT
HHHCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH
RKRA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]