Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010682 |
Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187927568
Identifier: 187927568
GI number: 187927568
Start: 502081
End: 502395
Strand: Reverse
Name: 187927568
Synonym: Rpic_0468
Alternate gene names: NA
Gene position: 502395-502081 (Counterclockwise)
Preceding gene: 187927569
Following gene: 187927563
Centisome position: 12.74
GC content: 65.08
Gene sequence:
>315_bases ATGAGCATCACGCCCGGAACGCCCGCGCGCCGGCGGTGGATCGCCAATATGCGCTGGATCGCGGCACTGCTCGCGGTGTG GTTTGTGGTGACGTTCGTGGTCGCGTTCTTTGCGCGCGACCTGTCGCAGCACTTCTTCAACTCGGACTGGACCTTCGCCT ATTGGGTCGGCGCGCAGGGGGCGCCCATCGTCTATGTGCTGATTACCGTGCTGTATGCGTGGCGCACGAACCGGGCTGCA GATGCAGCCGCACAACACGACGAAGCGGCGCAGCGCGATCCGTCGGAGTCATCCCACCTGCCGCCGTCCATCTGA
Upstream 100 bases:
>100_bases TCGAGGTGCTCGACAACGTGTATCAAGTGTCGCCGCGGCTGGCGGGGGCGCGCTTTCGCATCACGCTGCACCGCTGCTCG CCGAGCGAGGAACCCAACGC
Downstream 100 bases:
>100_bases CCTGGACGTTACGCTTCACCCAGATGGCGCAGCTTCACAAAGGCCAACGCGGCCATCACCGCGTCGTTGAGCGCGTCGTG CGCGTCCCACGTGGGCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSITPGTPARRRWIANMRWIAALLAVWFVVTFVVAFFARDLSQHFFNSDWTFAYWVGAQGAPIVYVLITVLYAWRTNRAA DAAAQHDEAAQRDPSESSHLPPSI
Sequences:
>Translated_104_residues MSITPGTPARRRWIANMRWIAALLAVWFVVTFVVAFFARDLSQHFFNSDWTFAYWVGAQGAPIVYVLITVLYAWRTNRAA DAAAQHDEAAQRDPSESSHLPPSI >Mature_103_residues SITPGTPARRRWIANMRWIAALLAVWFVVTFVVAFFARDLSQHFFNSDWTFAYWVGAQGAPIVYVLITVLYAWRTNRAAD AAAQHDEAAQRDPSESSHLPPSI
Specific function: Unknown
COG id: COG4327
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11766; Mature: 11635
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITPGTPARRRWIANMRWIAALLAVWFVVTFVVAFFARDLSQHFFNSDWTFAYWVGAQG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC APIVYVLITVLYAWRTNRAADAAAQHDEAAQRDPSESSHLPPSI CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SITPGTPARRRWIANMRWIAALLAVWFVVTFVVAFFARDLSQHFFNSDWTFAYWVGAQG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC APIVYVLITVLYAWRTNRAADAAAQHDEAAQRDPSESSHLPPSI CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA