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The map label for this gene is 187927532

Identifier: 187927532

GI number: 187927532

Start: 461506

End: 462174

Strand: Reverse

Name: 187927532

Synonym: Rpic_0432

Alternate gene names: NA

Gene position: 462174-461506 (Counterclockwise)

Preceding gene: 187927535

Following gene: 187927529

Centisome position: 11.72

GC content: 64.28

Gene sequence:

>669_bases
ATGGAGAAAACACTTGAAACAGACGACGCCCCAGTCAGAAAAGGCCGCCCGTATGGCGGCGTGGCGCCGGAGGCACGTGC
AGCAGAGCGCCGCGATGCGCTGATCCGTGCTGGCACGCGCGTCTTCGGCACGGTGGGCTTTCGCAAGGCCACCGTACGCG
CAATCTGCCAGGAAGCGAAGCTCAACGACCGGTACTTTTACGCCGCCTTTGACAGCACCGAAGCCCTGCTGCGTGCGACC
TATCAGCAGCATGCCGAAGACTTGCGCGCGCAGGTGTATGAAGCCACCGCCGCTGCGGAAGGCACGCTGGAAGCTCGTAT
CGACGCCGGCCTGCACGCGTTTTTCGTGTTCTTGCGTGAACCGTGTGCGGCGCGCGTGCTGCTGCTCGAAGTGATGGGCG
TGAGCCCGGAAACGGACGCGACCTACCAGCGCAACCTGCTGGAGTTCGGCAAGCAGATCATGGCGAATGCCCAACTGCCC
GGCGCCCACAATGACGATGACGCCGAGTTGCGCGCCGACCAACGCATCATCGGCCTGGCGCTGGTGGGCGCCCTGACCAA
CGTCGGTGCTGCGTGGCTTCTGACCGGCTATCGAGATCCCGAAGAGAAGATGGTGCGCAACTGCCGGCAAGTCGTGCTCG
GCACGTTGCGCGCCATGCTGGGCGTTTAG

Upstream 100 bases:

>100_bases
CTGTTTGCAGCCTTGCGGGCAGGCGTGGCAAATTTCGCTCTAAATGTGGTGTGATTCGTCACCACTTTAATTTTCAGGCG
TCCTGACGTCAAATAGCGAA

Downstream 100 bases:

>100_bases
GCCGATCCTTCCAGCCTGCCCAGTCGAACCACGGTCACGCCGGGGGCCAGATGCCGCAGCGATGGCTGCAGCAGCACGCA
GTTGTCGTACGGCGTGACGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Egulator TetR Family; TetR-Family Regulatory Protein

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MEKTLETDDAPVRKGRPYGGVAPEARAAERRDALIRAGTRVFGTVGFRKATVRAICQEAKLNDRYFYAAFDSTEALLRAT
YQQHAEDLRAQVYEATAAAEGTLEARIDAGLHAFFVFLREPCAARVLLLEVMGVSPETDATYQRNLLEFGKQIMANAQLP
GAHNDDDAELRADQRIIGLALVGALTNVGAAWLLTGYRDPEEKMVRNCRQVVLGTLRAMLGV

Sequences:

>Translated_222_residues
MEKTLETDDAPVRKGRPYGGVAPEARAAERRDALIRAGTRVFGTVGFRKATVRAICQEAKLNDRYFYAAFDSTEALLRAT
YQQHAEDLRAQVYEATAAAEGTLEARIDAGLHAFFVFLREPCAARVLLLEVMGVSPETDATYQRNLLEFGKQIMANAQLP
GAHNDDDAELRADQRIIGLALVGALTNVGAAWLLTGYRDPEEKMVRNCRQVVLGTLRAMLGV
>Mature_222_residues
MEKTLETDDAPVRKGRPYGGVAPEARAAERRDALIRAGTRVFGTVGFRKATVRAICQEAKLNDRYFYAAFDSTEALLRAT
YQQHAEDLRAQVYEATAAAEGTLEARIDAGLHAFFVFLREPCAARVLLLEVMGVSPETDATYQRNLLEFGKQIMANAQLP
GAHNDDDAELRADQRIIGLALVGALTNVGAAWLLTGYRDPEEKMVRNCRQVVLGTLRAMLGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24414; Mature: 24414

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTLETDDAPVRKGRPYGGVAPEARAAERRDALIRAGTRVFGTVGFRKATVRAICQEAK
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
LNDRYFYAAFDSTEALLRATYQQHAEDLRAQVYEATAAAEGTLEARIDAGLHAFFVFLRE
CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
PCAARVLLLEVMGVSPETDATYQRNLLEFGKQIMANAQLPGAHNDDDAELRADQRIIGLA
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
LVGALTNVGAAWLLTGYRDPEEKMVRNCRQVVLGTLRAMLGV
HHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKTLETDDAPVRKGRPYGGVAPEARAAERRDALIRAGTRVFGTVGFRKATVRAICQEAK
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
LNDRYFYAAFDSTEALLRATYQQHAEDLRAQVYEATAAAEGTLEARIDAGLHAFFVFLRE
CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
PCAARVLLLEVMGVSPETDATYQRNLLEFGKQIMANAQLPGAHNDDDAELRADQRIIGLA
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
LVGALTNVGAAWLLTGYRDPEEKMVRNCRQVVLGTLRAMLGV
HHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA