Click here to switch to the map view.

The map label for this gene is ygaZ [H]

Identifier: 187927492

GI number: 187927492

Start: 413138

End: 413866

Strand: Reverse

Name: ygaZ [H]

Synonym: Rpic_0389

Alternate gene names: 187927492

Gene position: 413866-413138 (Counterclockwise)

Preceding gene: 187927493

Following gene: 187927491

Centisome position: 10.5

GC content: 69.96

Gene sequence:

>729_bases
ATGGTTTCCCCCCGCGCCGTTGAGTTTCGCGCCGGCATGCTGGCGCTCGCGCCCATGCTGCTGGGCGTGGTGCCGTTCGG
CCTGATCTACGGCGTGCTCGCCACGTCGGCCGGCATGCCCGCGTGGCTTGCCGTGGCGATGAGCGCCATCGTTTTCGGTG
GCGCCTCGCAGATGATCCTCGTGCAGTTGTGGGCCGGTGGCGCGCCCGCGCTGGTGATTGCGGCGACGGTCTCGATGGTG
AATCTGCGGCACGCGCTGTATTCGGCCAGCATTGCGCCGGCGCTGGCGCACCTGCCGCGCCGCTGGAAATGGCTGATCGC
CTATCTGCTGACCGACGAGGCCTTCGCCGCCATGAACCGCCGCGTTGTCACCGCGCAGGCCGGTAGCGCGGAAGCTGCCT
ATCGCCATTGGTATTTCCTCGGCGCTGGCGTGGCGCTGTGGTCGAGCTGGCAGGCGTCGACGATCGTCGGCGTGGTGCTG
GGCGCGCAGGTGCCGACCTCGTGGCCGCTCGATTTCTTCCTGCCGCTGACGTTCATCGCCATCGTGGTGCCGGCACTGCG
CACGCGCGCACAACTCGCTGCAGCGTTGGCGGGCGCCGCGCTGGCCGTGGCGTGGACGGGCTGGCCGCACAAGCTCGGGC
TGATGAGCGCGGCGTGCGTGGGCATTGCCGTCGGTGCGCTGGTTGAGCGCTTGCTTGCCCGGCCGTCCGACAAGGGGGCT
GCCGCATGA

Upstream 100 bases:

>100_bases
ACCTGCGCCGTGTGTGCAGCCGCTACAACGCGCTGGCGCCGCTGGCTCGCCTGCTCGATCAACTCGAAGATCGCGCGCAG
CAGATCGGCTACACGTTCTG

Downstream 100 bases:

>100_bases
AAGCCCTGATCCTCTTCGGCGTGCTGCTGATTGCCGGCGCGGCGACCTACCTGATCCGCCTATCGTTCATCGCGCTGGAA
GGGCGCATGAACCTGCCGAC

Product: AzlC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MVSPRAVEFRAGMLALAPMLLGVVPFGLIYGVLATSAGMPAWLAVAMSAIVFGGASQMILVQLWAGGAPALVIAATVSMV
NLRHALYSASIAPALAHLPRRWKWLIAYLLTDEAFAAMNRRVVTAQAGSAEAAYRHWYFLGAGVALWSSWQASTIVGVVL
GAQVPTSWPLDFFLPLTFIAIVVPALRTRAQLAAALAGAALAVAWTGWPHKLGLMSAACVGIAVGALVERLLARPSDKGA
AA

Sequences:

>Translated_242_residues
MVSPRAVEFRAGMLALAPMLLGVVPFGLIYGVLATSAGMPAWLAVAMSAIVFGGASQMILVQLWAGGAPALVIAATVSMV
NLRHALYSASIAPALAHLPRRWKWLIAYLLTDEAFAAMNRRVVTAQAGSAEAAYRHWYFLGAGVALWSSWQASTIVGVVL
GAQVPTSWPLDFFLPLTFIAIVVPALRTRAQLAAALAGAALAVAWTGWPHKLGLMSAACVGIAVGALVERLLARPSDKGA
AA
>Mature_242_residues
MVSPRAVEFRAGMLALAPMLLGVVPFGLIYGVLATSAGMPAWLAVAMSAIVFGGASQMILVQLWAGGAPALVIAATVSMV
NLRHALYSASIAPALAHLPRRWKWLIAYLLTDEAFAAMNRRVVTAQAGSAEAAYRHWYFLGAGVALWSSWQASTIVGVVL
GAQVPTSWPLDFFLPLTFIAIVVPALRTRAQLAAALAGAALAVAWTGWPHKLGLMSAACVGIAVGALVERLLARPSDKGA
AA

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=207, Percent_Identity=28.5024154589372, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 25255; Mature: 25255

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSPRAVEFRAGMLALAPMLLGVVPFGLIYGVLATSAGMPAWLAVAMSAIVFGGASQMIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEE
VQLWAGGAPALVIAATVSMVNLRHALYSASIAPALAHLPRRWKWLIAYLLTDEAFAAMNR
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RVVTAQAGSAEAAYRHWYFLGAGVALWSSWQASTIVGVVLGAQVPTSWPLDFFLPLTFIA
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
IVVPALRTRAQLAAALAGAALAVAWTGWPHKLGLMSAACVGIAVGALVERLLARPSDKGA
HHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AA
CC
>Mature Secondary Structure
MVSPRAVEFRAGMLALAPMLLGVVPFGLIYGVLATSAGMPAWLAVAMSAIVFGGASQMIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEE
VQLWAGGAPALVIAATVSMVNLRHALYSASIAPALAHLPRRWKWLIAYLLTDEAFAAMNR
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RVVTAQAGSAEAAYRHWYFLGAGVALWSSWQASTIVGVVLGAQVPTSWPLDFFLPLTFIA
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
IVVPALRTRAQLAAALAGAALAVAWTGWPHKLGLMSAACVGIAVGALVERLLARPSDKGA
HHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]