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The map label for this gene is mmgC [H]

Identifier: 187927451

GI number: 187927451

Start: 369773

End: 371560

Strand: Direct

Name: mmgC [H]

Synonym: Rpic_0348

Alternate gene names: 187927451

Gene position: 369773-371560 (Clockwise)

Preceding gene: 187927450

Following gene: 187927452

Centisome position: 9.38

GC content: 62.86

Gene sequence:

>1788_bases
ATGGGTCAATACACCGCACCGTTGCGCGACATGCAGTTTGTCCTCCATGAGCTTCTCGGCGTCGAGAACCACTTGAAGGA
GATGCCGCAGCACGCGGAGATCGATGCCGACACCATCAACCAGGTGATCGAGGAAGCGGGCAAGTTCTGCTCCGAAGTCA
TCTTCCCGCTCAACCAGTCCGGCGATCGCGAGGGCTGCACGTACCACGGCGACGGCGTGGTGACCGCTCCGAAGGGCTTC
AAGGAGGCGTATCAACAGTACGTCGAGGCCGGCTGGCCCTCGCTGGGCTGCGATCCGGAATACGGCGGCCAAGGTCTGCC
CATCCTGATCAACAACGCGCTGTACGAGATGCTGAATTCGGCCAACCAGGCCTGGACGATGTATCCGGGCCTGTCGCATG
GCGCGTACGAAGCCCTGCACGCACACGGCACCGACGAGCTCAAGCAGCGTTACCTGCCGAAACTGGTGTCGGGCGTGTGG
ACCGGCACGATGTGTCTGACCGAGCCGCATTGCGGCACCGACCTGGGCATCCTGCGCACCAGGGCTGAACCGCTGGCCGA
TGGCTCGTATGCCATCACCGGCACGAAGATCTTCATCTCGGCGGGCGAGCACGACCTGGCCGAGAACATCATTCACCTGG
TGCTGGCACGTCTGCCGGACGCGCCGGGCGGCACGAAGGGCATCTCGCTGTTCGTGGTGCCCAAGTTCATCCCCGATGCC
AACGGCAACCCGGGCGAGCGCAACACCGTGAAGTGCGGCTCCATCGAACACAAGATGGGCATTCACGGCAACGCTACCTG
CGTGATCAATCTGGACGGTGCGCGCGGTTGGATGGTCGGCGAGCCGAACAAGGGCCTGAACGCCATGTTCGTGATGATGA
ACGCCGCCCGTCTCGGCGTCGGCATGCAGAGCCTGGGCCTGACCGAAGTCGCGTACCAAAACTCCGCTGCCTACGCCAAG
GAACGTCTGCAGATGCGCAGCCTGTCGGGCCCGAAGGCACCGGACAAGCCGGCCGACCCGATCATCGTGCACCCGGACGT
GCGCCGCATGCTGCTGACGCAACGCGCCTTTGCCGAAGGCGGCCGTGCATTTAGCTACTGGATCGCCCTTCAGATCGACC
GAGAGCTGTCGCACTCCGATGAGTCGGCGCGCAAGGACGCCGCCGACCTCGTCGCGCTGCTGACGCCGATCGCCAAGGCT
TTCCTGAGCGACAACGCATTCATCTCCACCAACGAAGGCATGCAGGTATTCGGCGGCCACGGCTACATCGCCGAGTGGGG
CATGGAGCAGTACGTGCGCGACGCCCGCATCAACATGATCTACGAAGGCACGAATACCGTGCAGTCGCTGGACCTGCTGG
GCCGCAAGATCCTCGGCGACATGGGCGCCAAGATGAAGAAATTCGGCAAGCTGGTCCAGGACTTTGTGGAAGCCGAAGGC
ACCAACGAAGCCATGCAGGAATTCATCAACCCGCTGGCCGACATCGGTGACAAGGTCCAGAAGCTGACCATGGAAATCGG
CATGAAGGCAATGGCCAACCCGGACGAAGTCGGCGCCGCCGCTGTGCCGTACCTGCGTGTGGTCGGCCATCTGGTGTTCT
CGTACTTCTGGGCCCGCATGGCCAAGATCGCTCTGGAAAAGCAAGACAGTGGCGACTCGTTCTACAAGGTCAAGCTGGCG
ACGGCGCGCTTCTACTTTGCCAAGCTGCTGCCTGAGACCGCTTCGCAGATCCGCATGGCACGTGCCGGCGGCGCGACGCT
GATGGCACTCGAAGCCGACCTGTTCTAA

Upstream 100 bases:

>100_bases
CTGGCCATGGTGGCGCTTAACAAACTCATTCAGTCTTACCGAACCTGACGCGGCCGTCGCACACCTAGCGGGTCGCGCAG
CAACAACCAAGGAGCCCAAG

Downstream 100 bases:

>100_bases
CAGGCGCACTTACCCGGGGCGACGCGCAAAGACCGTCGCCCCGCTTGTCTCTTCCTCACCTCCCGCGAGGACACCATGAC
CCGCACTGAACTCCCCACCA

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MGQYTAPLRDMQFVLHELLGVENHLKEMPQHAEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPKGF
KEAYQQYVEAGWPSLGCDPEYGGQGLPILINNALYEMLNSANQAWTMYPGLSHGAYEALHAHGTDELKQRYLPKLVSGVW
TGTMCLTEPHCGTDLGILRTRAEPLADGSYAITGTKIFISAGEHDLAENIIHLVLARLPDAPGGTKGISLFVVPKFIPDA
NGNPGERNTVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNSAAYAK
ERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAFAEGGRAFSYWIALQIDRELSHSDESARKDAADLVALLTPIAKA
FLSDNAFISTNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKILGDMGAKMKKFGKLVQDFVEAEG
TNEAMQEFINPLADIGDKVQKLTMEIGMKAMANPDEVGAAAVPYLRVVGHLVFSYFWARMAKIALEKQDSGDSFYKVKLA
TARFYFAKLLPETASQIRMARAGGATLMALEADLF

Sequences:

>Translated_595_residues
MGQYTAPLRDMQFVLHELLGVENHLKEMPQHAEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPKGF
KEAYQQYVEAGWPSLGCDPEYGGQGLPILINNALYEMLNSANQAWTMYPGLSHGAYEALHAHGTDELKQRYLPKLVSGVW
TGTMCLTEPHCGTDLGILRTRAEPLADGSYAITGTKIFISAGEHDLAENIIHLVLARLPDAPGGTKGISLFVVPKFIPDA
NGNPGERNTVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNSAAYAK
ERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAFAEGGRAFSYWIALQIDRELSHSDESARKDAADLVALLTPIAKA
FLSDNAFISTNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKILGDMGAKMKKFGKLVQDFVEAEG
TNEAMQEFINPLADIGDKVQKLTMEIGMKAMANPDEVGAAAVPYLRVVGHLVFSYFWARMAKIALEKQDSGDSFYKVKLA
TARFYFAKLLPETASQIRMARAGGATLMALEADLF
>Mature_594_residues
GQYTAPLRDMQFVLHELLGVENHLKEMPQHAEIDADTINQVIEEAGKFCSEVIFPLNQSGDREGCTYHGDGVVTAPKGFK
EAYQQYVEAGWPSLGCDPEYGGQGLPILINNALYEMLNSANQAWTMYPGLSHGAYEALHAHGTDELKQRYLPKLVSGVWT
GTMCLTEPHCGTDLGILRTRAEPLADGSYAITGTKIFISAGEHDLAENIIHLVLARLPDAPGGTKGISLFVVPKFIPDAN
GNPGERNTVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGVGMQSLGLTEVAYQNSAAYAKE
RLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAFAEGGRAFSYWIALQIDRELSHSDESARKDAADLVALLTPIAKAF
LSDNAFISTNEGMQVFGGHGYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKILGDMGAKMKKFGKLVQDFVEAEGT
NEAMQEFINPLADIGDKVQKLTMEIGMKAMANPDEVGAAAVPYLRVVGHLVFSYFWARMAKIALEKQDSGDSFYKVKLAT
ARFYFAKLLPETASQIRMARAGGATLMALEADLF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=416, Percent_Identity=26.6826923076923, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI7656849, Length=364, Percent_Identity=29.6703296703297, Blast_Score=114, Evalue=4e-25,
Organism=Homo sapiens, GI21361497, Length=426, Percent_Identity=25.3521126760563, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI4557235, Length=421, Percent_Identity=27.5534441805226, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI76496475, Length=421, Percent_Identity=27.5534441805226, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI226958412, Length=460, Percent_Identity=25.2173913043478, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI4557233, Length=316, Percent_Identity=28.7974683544304, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI226958414, Length=395, Percent_Identity=26.0759493670886, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI4501857, Length=327, Percent_Identity=26.2996941896024, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI4557231, Length=315, Percent_Identity=26.031746031746, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI187960098, Length=315, Percent_Identity=26.031746031746, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4503943, Length=353, Percent_Identity=26.628895184136, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI87082384, Length=357, Percent_Identity=27.1708683473389, Blast_Score=121, Evalue=2e-28,
Organism=Escherichia coli, GI87081958, Length=331, Percent_Identity=27.7945619335347, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17533517, Length=423, Percent_Identity=25.7683215130024, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17569725, Length=369, Percent_Identity=28.4552845528455, Blast_Score=116, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17508101, Length=364, Percent_Identity=26.9230769230769, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=377, Percent_Identity=27.5862068965517, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17534899, Length=429, Percent_Identity=27.039627039627, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI86563381, Length=430, Percent_Identity=25.5813953488372, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=430, Percent_Identity=25.5813953488372, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=405, Percent_Identity=25.1851851851852, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17538396, Length=367, Percent_Identity=25.0681198910082, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17570075, Length=366, Percent_Identity=24.5901639344262, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=252, Percent_Identity=29.3650793650794, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=186, Percent_Identity=32.258064516129, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=230, Percent_Identity=27.3913043478261, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71982178, Length=292, Percent_Identity=24.3150684931507, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356377, Length=374, Percent_Identity=25.1336898395722, Blast_Score=108, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24646207, Length=378, Percent_Identity=26.1904761904762, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI281363737, Length=460, Percent_Identity=25, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24666513, Length=380, Percent_Identity=26.5789473684211, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21355753, Length=376, Percent_Identity=25, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24660351, Length=315, Percent_Identity=27.3015873015873, Blast_Score=86, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 65005; Mature: 64874

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQYTAPLRDMQFVLHELLGVENHLKEMPQHAEIDADTINQVIEEAGKFCSEVIFPLNQS
CCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
GDREGCTYHGDGVVTAPKGFKEAYQQYVEAGWPSLGCDPEYGGQGLPILINNALYEMLNS
CCCCCCEECCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHC
ANQAWTMYPGLSHGAYEALHAHGTDELKQRYLPKLVSGVWTGTMCLTEPHCGTDLGILRT
CCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHH
RAEPLADGSYAITGTKIFISAGEHDLAENIIHLVLARLPDAPGGTKGISLFVVPKFIPDA
CCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC
NGNPGERNTVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGV
CCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCC
GMQSLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAFAEG
CHHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCC
GRAFSYWIALQIDRELSHSDESARKDAADLVALLTPIAKAFLSDNAFISTNEGMQVFGGH
CCEEEEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCC
GYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKILGDMGAKMKKFGKLVQDFVEAEG
CCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TNEAMQEFINPLADIGDKVQKLTMEIGMKAMANPDEVGAAAVPYLRVVGHLVFSYFWARM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
AKIALEKQDSGDSFYKVKLATARFYFAKLLPETASQIRMARAGGATLMALEADLF
HHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
>Mature Secondary Structure 
GQYTAPLRDMQFVLHELLGVENHLKEMPQHAEIDADTINQVIEEAGKFCSEVIFPLNQS
CCCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
GDREGCTYHGDGVVTAPKGFKEAYQQYVEAGWPSLGCDPEYGGQGLPILINNALYEMLNS
CCCCCCEECCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHC
ANQAWTMYPGLSHGAYEALHAHGTDELKQRYLPKLVSGVWTGTMCLTEPHCGTDLGILRT
CCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHH
RAEPLADGSYAITGTKIFISAGEHDLAENIIHLVLARLPDAPGGTKGISLFVVPKFIPDA
CCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC
NGNPGERNTVKCGSIEHKMGIHGNATCVINLDGARGWMVGEPNKGLNAMFVMMNAARLGV
CCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHCC
GMQSLGLTEVAYQNSAAYAKERLQMRSLSGPKAPDKPADPIIVHPDVRRMLLTQRAFAEG
CHHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCC
GRAFSYWIALQIDRELSHSDESARKDAADLVALLTPIAKAFLSDNAFISTNEGMQVFGGH
CCEEEEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCC
GYIAEWGMEQYVRDARINMIYEGTNTVQSLDLLGRKILGDMGAKMKKFGKLVQDFVEAEG
CCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TNEAMQEFINPLADIGDKVQKLTMEIGMKAMANPDEVGAAAVPYLRVVGHLVFSYFWARM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
AKIALEKQDSGDSFYKVKLATARFYFAKLLPETASQIRMARAGGATLMALEADLF
HHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]