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The map label for this gene is 187927442

Identifier: 187927442

GI number: 187927442

Start: 360350

End: 360691

Strand: Direct

Name: 187927442

Synonym: Rpic_0339

Alternate gene names: NA

Gene position: 360350-360691 (Clockwise)

Preceding gene: 187927441

Following gene: 187927443

Centisome position: 9.14

GC content: 70.18

Gene sequence:

>342_bases
ATGCCGATCTATGCTTATCGATGCGACGCCTGCGGCCACGCCAAAGATGTGCTGCAGAAGATGAGCGACGCGCCGCTGAC
GGATTGCCCCGCATGCGGCGCGCCGGCGTTCAAGAAGCAGCTCACCGCTGCCGGCTTCCAGCTCAAGGGTTCGGGCTGGT
ACGTGACGGACTTCCGTGGCGGCTCGGGCGGCGCATCGGCTGCGGCTCCGGCAACCGGTTCGGCGGCCAAGACGGAGCCC
GCTGCGCCTGCGGCGGCTGCCGCGTCGTCGGACAGCGCGTCGTCCAGTGCCAGCACGCCGGCCGCGTCCGGTGGTTGCGG
CACGTCGTGCGCTTGCCACTGA

Upstream 100 bases:

>100_bases
TTCCGTGAGCCCGTCGTGCGCGTTTCTCGCACCGCGTTCGCGGCCCGCGCGGGCAATCCATCGCTTTCTTGTCATTTGTT
TGTTCCAGGGTGAGGACACC

Downstream 100 bases:

>100_bases
TCGCATCGCTCACCTTTCGGTCCATCGCCCCATGAAACAGAAAACCAGCGCACTCAAGACATGGTTCCTAACCGGTCTTC
TGGTGCTTGTCCCGCTTGCG

Product: FmdB family regulatory protein

Products: NA

Alternate protein names: FmdB Family Regulatory Protein; Type I Antifreeze Protein; Regulatory Protein; Regulatory Protein FmdB Family Protein; Regulatory Protein FmdB Family Domain-Containing; FmdB Transcriptional Regulator

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPIYAYRCDACGHAKDVLQKMSDAPLTDCPACGAPAFKKQLTAAGFQLKGSGWYVTDFRGGSGGASAAAPATGSAAKTEP
AAPAAAAASSDSASSSASTPAASGGCGTSCACH

Sequences:

>Translated_113_residues
MPIYAYRCDACGHAKDVLQKMSDAPLTDCPACGAPAFKKQLTAAGFQLKGSGWYVTDFRGGSGGASAAAPATGSAAKTEP
AAPAAAAASSDSASSSASTPAASGGCGTSCACH
>Mature_112_residues
PIYAYRCDACGHAKDVLQKMSDAPLTDCPACGAPAFKKQLTAAGFQLKGSGWYVTDFRGGSGGASAAAPATGSAAKTEPA
APAAAAASSDSASSSASTPAASGGCGTSCACH

Specific function: Unknown

COG id: COG2331

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10879; Mature: 10748

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIYAYRCDACGHAKDVLQKMSDAPLTDCPACGAPAFKKQLTAAGFQLKGSGWYVTDFRG
CCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCEEEEECCC
GSGGASAAAPATGSAAKTEPAAPAAAAASSDSASSSASTPAASGGCGTSCACH
CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIYAYRCDACGHAKDVLQKMSDAPLTDCPACGAPAFKKQLTAAGFQLKGSGWYVTDFRG
CCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCEEEEECCC
GSGGASAAAPATGSAAKTEPAAPAAAAASSDSASSSASTPAASGGCGTSCACH
CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA