Click here to switch to the map view.

The map label for this gene is 187927438

Identifier: 187927438

GI number: 187927438

Start: 355543

End: 356205

Strand: Direct

Name: 187927438

Synonym: Rpic_0335

Alternate gene names: NA

Gene position: 355543-356205 (Clockwise)

Preceding gene: 187927437

Following gene: 187927439

Centisome position: 9.02

GC content: 68.78

Gene sequence:

>663_bases
ATGTCCTCGACAGCCACTTCGTCTCCGTCTTCGTTTCCGCTCGTGCTGATGCAGCCGCTGCTGCTCGCGCTCAACCATCT
GCTGCGCCAGGAGCCCTGGGCGCAGGAGACGTTGCGGCCCTTCGCAGGCCGCGTGGCGCGCTTTGACCTGGCGCCCATGT
CGATGACGTTGCAGGTGGACGCCGCCGGCCTGGTGACCGCTCCCGCGCCTGATGTTGAACCGGCTGTGACCGTTGTCGTG
CCGCTCGCGGCCGCTGCCGGCGATTACGCCACGGGCGGGCAGGCCGCCGTGCTCAAGCACGTGCGCATCGAGGGCGAGGC
CGAATTTGCCAACGTACTGTCGACACTGCTGCGCAACCTGCGCTGGGATGCGGCCGAAGACCTCTCGCGTGTGTTTGGCG
ACGTGATCGCGCAGCGCATGGTGAGCGGCGCCCAGGCCGCCCGCACCGAAGCCACGCGCGTCAGCCGTTCGCTGGCGGAA
TCGGTGGCGTCGTACCTGACCGATGAGCAACCGACGCTGGTGCGCCATGCGCGCCTTGCGCAGTTCGCCGCCGATGTGGC
CGCACTGCGTGACGCCGAAGCGCGTCTGGTCAAACGGCTGGAGCGGCTCGAAAAGCTCCCGCGACCGGCCACCCGGACCG
CACGTCAGGGTGAATCGGCATGA

Upstream 100 bases:

>100_bases
CCGTAAAATAGGGCCCGACCGTCTGGTTCGGGCCCTTTTTGTTGCCCGCCGCTAGCCCGCTTTTTGCTGCTTTCTTGCTG
TTTTTGCGCACCGTCACCGC

Downstream 100 bases:

>100_bases
CGCGCTTCTTCCGGCTGGGCAAGATCGTTTTCGTCATCCTCTATTACGGGCTGGATCAGCTCGCGTTGTCGGGCTTCAAG
AGCCGCCGCATTCGCGCGCT

Product: Sterol-binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSSTATSSPSSFPLVLMQPLLLALNHLLRQEPWAQETLRPFAGRVARFDLAPMSMTLQVDAAGLVTAPAPDVEPAVTVVV
PLAAAAGDYATGGQAAVLKHVRIEGEAEFANVLSTLLRNLRWDAAEDLSRVFGDVIAQRMVSGAQAARTEATRVSRSLAE
SVASYLTDEQPTLVRHARLAQFAADVAALRDAEARLVKRLERLEKLPRPATRTARQGESA

Sequences:

>Translated_220_residues
MSSTATSSPSSFPLVLMQPLLLALNHLLRQEPWAQETLRPFAGRVARFDLAPMSMTLQVDAAGLVTAPAPDVEPAVTVVV
PLAAAAGDYATGGQAAVLKHVRIEGEAEFANVLSTLLRNLRWDAAEDLSRVFGDVIAQRMVSGAQAARTEATRVSRSLAE
SVASYLTDEQPTLVRHARLAQFAADVAALRDAEARLVKRLERLEKLPRPATRTARQGESA
>Mature_219_residues
SSTATSSPSSFPLVLMQPLLLALNHLLRQEPWAQETLRPFAGRVARFDLAPMSMTLQVDAAGLVTAPAPDVEPAVTVVVP
LAAAAGDYATGGQAAVLKHVRIEGEAEFANVLSTLLRNLRWDAAEDLSRVFGDVIAQRMVSGAQAARTEATRVSRSLAES
VASYLTDEQPTLVRHARLAQFAADVAALRDAEARLVKRLERLEKLPRPATRTARQGESA

Specific function: Unknown

COG id: COG3165

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23632; Mature: 23501

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTATSSPSSFPLVLMQPLLLALNHLLRQEPWAQETLRPFAGRVARFDLAPMSMTLQVD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
AAGLVTAPAPDVEPAVTVVVPLAAAAGDYATGGQAAVLKHVRIEGEAEFANVLSTLLRNL
CCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
RWDAAEDLSRVFGDVIAQRMVSGAQAARTEATRVSRSLAESVASYLTDEQPTLVRHARLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QFAADVAALRDAEARLVKRLERLEKLPRPATRTARQGESA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure 
SSTATSSPSSFPLVLMQPLLLALNHLLRQEPWAQETLRPFAGRVARFDLAPMSMTLQVD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
AAGLVTAPAPDVEPAVTVVVPLAAAAGDYATGGQAAVLKHVRIEGEAEFANVLSTLLRNL
CCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
RWDAAEDLSRVFGDVIAQRMVSGAQAARTEATRVSRSLAESVASYLTDEQPTLVRHARLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QFAADVAALRDAEARLVKRLERLEKLPRPATRTARQGESA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA