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The map label for this gene is yqaA [H]

Identifier: 187927431

GI number: 187927431

Start: 345770

End: 346351

Strand: Direct

Name: yqaA [H]

Synonym: Rpic_0328

Alternate gene names: 187927431

Gene position: 345770-346351 (Clockwise)

Preceding gene: 187927430

Following gene: 187927432

Centisome position: 8.77

GC content: 64.6

Gene sequence:

>582_bases
ATGGAACAGTGGATCGACACGCTTTTTGCCACGCTCGCCCTGCCAAAGGTCGGGCTGCCCGCCATCTTCGTCGTCAGTTT
CATTTCGGCGACGCTCTTGCCGCTGGGCTCAGAGCCCGCCGTGTTTGCTTACATCAAGCTCAATCCGGAGATGTTCTGGC
CGGCCATCATTGTCGCCACGCTCGGCAACACGCTGGGCGGCGTGGTCGACTGGTGGATGGGCTACGCGGCCAAGCTGGCG
CTGGTGCGCTACCACCTGGGGCGCCGCCGCCGGCAGCACAACGTCGAGCACGCCCATCACGTGCCGCACCCCAAGCGCCA
CCGTGAACCTCCGCTCGACAAGAAGTACTTCCGCTGGATGCGCCGCATCGGGCCGGTGTCGCTGCTGGTGTCGTGGCTGC
CGGGCATCGGCGATCCGCTGTGCACGCTGGCCGGCTGGCTGCGCCTGAAGTTCTGGCCGAGCGTCATGTACATGGCGATC
GGCAAATTCCTGCGCTATCTGGCGATGACAGCAGCGCTCATGACCTTGCCCGACGGCTTCTGGCACGGCATCCTGGGCTG
GATCAAGAGCGTGATGATGTGA

Upstream 100 bases:

>100_bases
GCTGATCGGCGCCGTGCTTGTTGCCTACCTGTTCTTCGCCTGACCGGCTAGGGCGGCCCCCAAGCGACGCCGCGGCCGCT
CGCACTCTACAATCGATCGC

Downstream 100 bases:

>100_bases
CGTTTGCGTGGCGTTCGGCGCACTCGATCAGGCCTGCGCTTTTCGCAAGCCATTGAAAACGCGATGGTTTTGCCGCCCAT
ATCACCGGCAGGGATACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MEQWIDTLFATLALPKVGLPAIFVVSFISATLLPLGSEPAVFAYIKLNPEMFWPAIIVATLGNTLGGVVDWWMGYAAKLA
LVRYHLGRRRRQHNVEHAHHVPHPKRHREPPLDKKYFRWMRRIGPVSLLVSWLPGIGDPLCTLAGWLRLKFWPSVMYMAI
GKFLRYLAMTAALMTLPDGFWHGILGWIKSVMM

Sequences:

>Translated_193_residues
MEQWIDTLFATLALPKVGLPAIFVVSFISATLLPLGSEPAVFAYIKLNPEMFWPAIIVATLGNTLGGVVDWWMGYAAKLA
LVRYHLGRRRRQHNVEHAHHVPHPKRHREPPLDKKYFRWMRRIGPVSLLVSWLPGIGDPLCTLAGWLRLKFWPSVMYMAI
GKFLRYLAMTAALMTLPDGFWHGILGWIKSVMM
>Mature_193_residues
MEQWIDTLFATLALPKVGLPAIFVVSFISATLLPLGSEPAVFAYIKLNPEMFWPAIIVATLGNTLGGVVDWWMGYAAKLA
LVRYHLGRRRRQHNVEHAHHVPHPKRHREPPLDKKYFRWMRRIGPVSLLVSWLPGIGDPLCTLAGWLRLKFWPSVMYMAI
GKFLRYLAMTAALMTLPDGFWHGILGWIKSVMM

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=156, Percent_Identity=34.6153846153846, Blast_Score=87, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22058; Mature: 22058

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQWIDTLFATLALPKVGLPAIFVVSFISATLLPLGSEPAVFAYIKLNPEMFWPAIIVAT
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHH
LGNTLGGVVDWWMGYAAKLALVRYHLGRRRRQHNVEHAHHVPHPKRHREPPLDKKYFRWM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHCCCCCCCHHHHHHH
RRIGPVSLLVSWLPGIGDPLCTLAGWLRLKFWPSVMYMAIGKFLRYLAMTAALMTLPDGF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
WHGILGWIKSVMM
HHHHHHHHHHHHC
>Mature Secondary Structure
MEQWIDTLFATLALPKVGLPAIFVVSFISATLLPLGSEPAVFAYIKLNPEMFWPAIIVAT
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHH
LGNTLGGVVDWWMGYAAKLALVRYHLGRRRRQHNVEHAHHVPHPKRHREPPLDKKYFRWM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHCCCCCCCHHHHHHH
RRIGPVSLLVSWLPGIGDPLCTLAGWLRLKFWPSVMYMAIGKFLRYLAMTAALMTLPDGF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
WHGILGWIKSVMM
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]