Click here to switch to the map view.

The map label for this gene is yhbN [C]

Identifier: 187927372

GI number: 187927372

Start: 280152

End: 280739

Strand: Reverse

Name: yhbN [C]

Synonym: Rpic_0265

Alternate gene names: 187927372

Gene position: 280739-280152 (Counterclockwise)

Preceding gene: 187927373

Following gene: 187927371

Centisome position: 7.12

GC content: 66.5

Gene sequence:

>588_bases
ATGACTCTTTCCCTCCGTGCTGCCGGCCTCGCCATCGTCGCTGCGCTGCTGCTCCCGGCCCTGCCCGCGCATGCCGAGCG
CGCCGACCGAGACAAGCCGCTCGTGCTCGAAGCCGACAACGCCAGCTACGACGATCTGAAGCAGGTCTATCACTTGACCG
GCAACGTGGTGCTGACCAAGGGCACCATGGTGCTGCGCTCCGACCAGGCCGATCTGCGTACCGACCCCGAGGGCTACAAC
TACGCCGTCGCCACGTCCAAGCCCGGCAACCTCGCCTTCATTCGCCAGAAGCGCGACAACGTCGACGAATACATCCAGGG
TTGGGGCGAGCGCATCGAATACGACGGCAAGCAAGAGATTTCCAAGCTGATCACCCGCGCACGCATGGAACGCCTCCAAG
GCGCGACGCAGCTCGACGAGATCCGCGGCGCAGTAATCACGTACGACGGCCAGAAAGAGTTCTACACGGCCTCGGGCGGC
GCAGAGAACGCCACTGCAGCCAACCCGTCGGGCCGCGTGCGCGCCGTTCTGGCACCGCGCACGAGCGCGCCTGCCGCGCC
AGCATCTGCCCCGGCTGCCAAGCCCTGA

Upstream 100 bases:

>100_bases
TGCGGGGCCGAATTGAAGGGCTGGGGGCGCCGAAGCAGTAAACTCTGCCCCCGACACCTGACTACGCCCACCGACCGCGC
CCTTCTCCGACGTGATCCCC

Downstream 100 bases:

>100_bases
TCCGTACCGCCTGCCTTTTCAGCTTCGCTTATGTCCGCCACCACCCTCGCCCCCAAGACTGCAGCGCCGCAGGCCACGAC
TTCCAGCACGCTGGTCGTCC

Product: lipopolysaccharide transport periplasmic protein LptA

Products: NA

Alternate protein names: OstA-Like Protein; OstA Family Protein; OstA-Like Family Protein; Signal Peptide Protein; Cell Envelope Biogenesis Protein YhbN; Lipopolysaccharide Transport Periplasmic Protein Lpta; Protein YhbN; Exported Protein

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTLSLRAAGLAIVAALLLPALPAHAERADRDKPLVLEADNASYDDLKQVYHLTGNVVLTKGTMVLRSDQADLRTDPEGYN
YAVATSKPGNLAFIRQKRDNVDEYIQGWGERIEYDGKQEISKLITRARMERLQGATQLDEIRGAVITYDGQKEFYTASGG
AENATAANPSGRVRAVLAPRTSAPAAPASAPAAKP

Sequences:

>Translated_195_residues
MTLSLRAAGLAIVAALLLPALPAHAERADRDKPLVLEADNASYDDLKQVYHLTGNVVLTKGTMVLRSDQADLRTDPEGYN
YAVATSKPGNLAFIRQKRDNVDEYIQGWGERIEYDGKQEISKLITRARMERLQGATQLDEIRGAVITYDGQKEFYTASGG
AENATAANPSGRVRAVLAPRTSAPAAPASAPAAKP
>Mature_194_residues
TLSLRAAGLAIVAALLLPALPAHAERADRDKPLVLEADNASYDDLKQVYHLTGNVVLTKGTMVLRSDQADLRTDPEGYNY
AVATSKPGNLAFIRQKRDNVDEYIQGWGERIEYDGKQEISKLITRARMERLQGATQLDEIRGAVITYDGQKEFYTASGGA
ENATAANPSGRVRAVLAPRTSAPAAPASAPAAKP

Specific function: Unknown

COG id: COG1934

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20993; Mature: 20862

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSLRAAGLAIVAALLLPALPAHAERADRDKPLVLEADNASYDDLKQVYHLTGNVVLTK
CEEECHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEC
GTMVLRSDQADLRTDPEGYNYAVATSKPGNLAFIRQKRDNVDEYIQGWGERIEYDGKQEI
CEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHH
SKLITRARMERLQGATQLDEIRGAVITYDGQKEFYTASGGAENATAANPSGRVRAVLAPR
HHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCC
TSAPAAPASAPAAKP
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLSLRAAGLAIVAALLLPALPAHAERADRDKPLVLEADNASYDDLKQVYHLTGNVVLTK
EEECHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEC
GTMVLRSDQADLRTDPEGYNYAVATSKPGNLAFIRQKRDNVDEYIQGWGERIEYDGKQEI
CEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHH
SKLITRARMERLQGATQLDEIRGAVITYDGQKEFYTASGGAENATAANPSGRVRAVLAPR
HHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCC
TSAPAAPASAPAAKP
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA