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The map label for this gene is lolB

Identifier: 187927359

GI number: 187927359

Start: 266146

End: 266769

Strand: Reverse

Name: lolB

Synonym: Rpic_0252

Alternate gene names: 187927359

Gene position: 266769-266146 (Counterclockwise)

Preceding gene: 187927360

Following gene: 187927358

Centisome position: 6.77

GC content: 67.31

Gene sequence:

>624_bases
ATGGCAATGCGGTTCGCGCACGCGCTTGGCGCGCTGATGCTCGGCGCTGGCTGCGCGCTGTTCAGCGGCTGCGCAAGCTT
GCGGCCAGCCAACGATCTCTTCGCTGGCACACAAGACGCCGATACCAACATCACGCGTTATCAAGGTCGCTTCTCGGCCC
GTTACACGCAAAACAACGCCGAGCAAAGCGCCGTCGGCAGCTTCCTGTGGCGCGAGCGCGGACCCGACGTGCAGCTTGAG
TTGATGTCGCCGCTGGGCCAGACGCTTGCCATCGTCAGCCAAAGCAACCAGGGCGCCACGCTCGAACTGCCGAACCAGCC
GCCTCGCCGCGCCCCCGAGGTCGACACGCTGATGCAGGATGCGCTCGGCTTTTCGCTGCCGGTCTCCGGCTTGCGCGACT
GGCTGCGCGCCCGCCCCGCGCCCGGCACACCGGCACGCGTGGCACGCGATGCGCAATCGCGCCCCGAAACCATCGAGCAG
AACGGCTGGACTGTCCACTACGTCGCCTGGACTGACGACGGCAACAACACCGATGGTGCCAAGGTCGGCATCCGCCGGCT
CGATCTTGATCGCCCGCAGGGCACCAACGGCCCGCTCTCGGTGCGGCTCGTGCTCGACCAGTAA

Upstream 100 bases:

>100_bases
GGACCGAAGCGTCCAAGCTCGACGTAAACGACACCACGCTGCGCGACACGCTGCGCCGCTTCGGCCAGCCGGTGCCCAAT
GTTCCCGTGAGTACAAATTG

Downstream 100 bases:

>100_bases
CGCCTCGCTTCGCCATGTCTTCCGCCCCCGTCGAGCTGCGTGATTGCCCCGCGCCTGCCAAGCTCAATCTCTTCCTGCAT
GTAGTCGGCCGCCGGCCCGA

Product: outer membrane lipoprotein LolB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAMRFAHALGALMLGAGCALFSGCASLRPANDLFAGTQDADTNITRYQGRFSARYTQNNAEQSAVGSFLWRERGPDVQLE
LMSPLGQTLAIVSQSNQGATLELPNQPPRRAPEVDTLMQDALGFSLPVSGLRDWLRARPAPGTPARVARDAQSRPETIEQ
NGWTVHYVAWTDDGNNTDGAKVGIRRLDLDRPQGTNGPLSVRLVLDQ

Sequences:

>Translated_207_residues
MAMRFAHALGALMLGAGCALFSGCASLRPANDLFAGTQDADTNITRYQGRFSARYTQNNAEQSAVGSFLWRERGPDVQLE
LMSPLGQTLAIVSQSNQGATLELPNQPPRRAPEVDTLMQDALGFSLPVSGLRDWLRARPAPGTPARVARDAQSRPETIEQ
NGWTVHYVAWTDDGNNTDGAKVGIRRLDLDRPQGTNGPLSVRLVLDQ
>Mature_206_residues
AMRFAHALGALMLGAGCALFSGCASLRPANDLFAGTQDADTNITRYQGRFSARYTQNNAEQSAVGSFLWRERGPDVQLEL
MSPLGQTLAIVSQSNQGATLELPNQPPRRAPEVDTLMQDALGFSLPVSGLRDWLRARPAPGTPARVARDAQSRPETIEQN
GWTVHYVAWTDDGNNTDGAKVGIRRLDLDRPQGTNGPLSVRLVLDQ

Specific function: Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the lolA protein

COG id: COG3017

COG function: function code M; Outer membrane lipoprotein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LOLB_RALPJ (B2UER8)

Other databases:

- EMBL:   CP001068
- RefSeq:   YP_001897846.1
- ProteinModelPortal:   B2UER8
- SMR:   B2UER8
- GeneID:   6286865
- GenomeReviews:   CP001068_GR
- KEGG:   rpi:Rpic_0252
- HOGENOM:   HBG451855
- OMA:   PRNAPEV
- ProtClustDB:   PRK00022
- HAMAP:   MF_00233
- InterPro:   IPR004565
- TIGRFAMs:   TIGR00548

Pfam domain/function: PF03550 LolB

EC number: NA

Molecular weight: Translated: 22472; Mature: 22341

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMRFAHALGALMLGAGCALFSGCASLRPANDLFAGTQDADTNITRYQGRFSARYTQNNA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEEECCCEEEEECCCCC
EQSAVGSFLWRERGPDVQLELMSPLGQTLAIVSQSNQGATLELPNQPPRRAPEVDTLMQD
HHHHHHHHHHHCCCCCEEEEEHHHCCCEEEEEECCCCCCEEECCCCCCCCCCHHHHHHHH
ALGFSLPVSGLRDWLRARPAPGTPARVARDAQSRPETIEQNGWTVHYVAWTDDGNNTDGA
HHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHCCCCEEEEEEEECCCCCCCCH
KVGIRRLDLDRPQGTNGPLSVRLVLDQ
HHCEEEECCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
AMRFAHALGALMLGAGCALFSGCASLRPANDLFAGTQDADTNITRYQGRFSARYTQNNA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEEECCCEEEEECCCCC
EQSAVGSFLWRERGPDVQLELMSPLGQTLAIVSQSNQGATLELPNQPPRRAPEVDTLMQD
HHHHHHHHHHHCCCCCEEEEEHHHCCCEEEEEECCCCCCEEECCCCCCCCCCHHHHHHHH
ALGFSLPVSGLRDWLRARPAPGTPARVARDAQSRPETIEQNGWTVHYVAWTDDGNNTDGA
HHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHCCCCEEEEEEEECCCCCCCCH
KVGIRRLDLDRPQGTNGPLSVRLVLDQ
HHCEEEECCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA