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The map label for this gene is ybiB [H]

Identifier: 187927341

GI number: 187927341

Start: 248956

End: 249966

Strand: Reverse

Name: ybiB [H]

Synonym: Rpic_0234

Alternate gene names: 187927341

Gene position: 249966-248956 (Counterclockwise)

Preceding gene: 187927342

Following gene: 187927338

Centisome position: 6.34

GC content: 69.63

Gene sequence:

>1011_bases
ATGCCTGCCCCTCCCATCCTCCCCGACACCGCCGCTGAAGACGCCCTCGCGAACGCCCCCTTCCCCGCTGCCCGCTTCAT
CAAGGAAATCGGCCGCGGCGCAGACGGCGCCCGCGCGCTGGTCAAGCACGATGCCCGTGCGCTCTTCACGGCCATGCTGG
AAAGCCGCATCTCCGACGTGCAGCTCGGCGCCATCCTCATGGCCTACCGCATCAAAGGCGAGACCCCGGAAGAACTCGAC
GGCATGCTCGAAGCCACGCATGCGCATTGCCGGCCGCTGCCGGCGCCGGACACGCCCGAGCATGCGTTGCCAGTCGTCAT
CCCCAGCTACAACGGCGCCCGCCGCCAGCCGAACCTGGTGCCGCTGCTGGCCAAGCTGCTGGCGCGCGAAGGTGTGCCGG
TGCTGGTGCATGGCATCCGCCGCTTCGACGGCCGCGTCACCACGGCTGCGCTGTTCGAAGCGCTCGGCTGGCCCCTCTGC
GAACACATGGACGACGCCCGCGAGCGCCTGGAGCGCGATCGCCTGGCCTATGTGCCGATCGACGTGCTCTCTCCCGAACT
GACGGCACTGCTGGATAAGCGCGAGATCGTCGGCCTGCGCAATTCCGCCCACACGGTGGTGAAGATGCTGCAGCCCGTCG
GCGGGCACGCGCCGCACGAGGCGCTACGGCTGGTCAGCTACACGCACCCGGAATACCGCGACACGCTCACCGATTACTTC
CTGCGTCATCCGGCCAACGTGCTGCTGGCGCGCGGCACCGAAGGCGAGGCAGTGGCCGATGCGCGGCGCGGCAGCGCGGT
GGAGTGGCTGCACGACGGCGCGCACGAAACGGTGATCGAAGCGGTGGAAGGTTCAAGCGACGCACCGCCTGAGCTGCCCG
TGGGGACAGACGTGGCGGCAACGGCGCGGTGGATTGAAGCGGTGCTCGACGGCAAGCAGCCGGTGCCGGAGCCGATCGCC
AAGCAGGTCCGCGCGATCGTGCGCTGTGCACGACCGGCGCAGGCTGCCTGA

Upstream 100 bases:

>100_bases
AAGGGATGCACCACCAGGGCAAAAAACACCACGGCATGGCGCCAGCGCGCAACCCACAGCGCTATGATCACCCCCGAGCC
CATCACCCGCGCCATGAACA

Downstream 100 bases:

>100_bases
TCGATCGCCCGGTCTTACTTGGACGGCAGCGGAATGCGCTCCGTTTCGCCGGGCACGTGAGCGAAGGCGTCGCTCTCCCA
GCGCTGCTTGGCGTCTTCAA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MPAPPILPDTAAEDALANAPFPAARFIKEIGRGADGARALVKHDARALFTAMLESRISDVQLGAILMAYRIKGETPEELD
GMLEATHAHCRPLPAPDTPEHALPVVIPSYNGARRQPNLVPLLAKLLAREGVPVLVHGIRRFDGRVTTAALFEALGWPLC
EHMDDARERLERDRLAYVPIDVLSPELTALLDKREIVGLRNSAHTVVKMLQPVGGHAPHEALRLVSYTHPEYRDTLTDYF
LRHPANVLLARGTEGEAVADARRGSAVEWLHDGAHETVIEAVEGSSDAPPELPVGTDVAATARWIEAVLDGKQPVPEPIA
KQVRAIVRCARPAQAA

Sequences:

>Translated_336_residues
MPAPPILPDTAAEDALANAPFPAARFIKEIGRGADGARALVKHDARALFTAMLESRISDVQLGAILMAYRIKGETPEELD
GMLEATHAHCRPLPAPDTPEHALPVVIPSYNGARRQPNLVPLLAKLLAREGVPVLVHGIRRFDGRVTTAALFEALGWPLC
EHMDDARERLERDRLAYVPIDVLSPELTALLDKREIVGLRNSAHTVVKMLQPVGGHAPHEALRLVSYTHPEYRDTLTDYF
LRHPANVLLARGTEGEAVADARRGSAVEWLHDGAHETVIEAVEGSSDAPPELPVGTDVAATARWIEAVLDGKQPVPEPIA
KQVRAIVRCARPAQAA
>Mature_335_residues
PAPPILPDTAAEDALANAPFPAARFIKEIGRGADGARALVKHDARALFTAMLESRISDVQLGAILMAYRIKGETPEELDG
MLEATHAHCRPLPAPDTPEHALPVVIPSYNGARRQPNLVPLLAKLLAREGVPVLVHGIRRFDGRVTTAALFEALGWPLCE
HMDDARERLERDRLAYVPIDVLSPELTALLDKREIVGLRNSAHTVVKMLQPVGGHAPHEALRLVSYTHPEYRDTLTDYFL
RHPANVLLARGTEGEAVADARRGSAVEWLHDGAHETVIEAVEGSSDAPPELPVGTDVAATARWIEAVLDGKQPVPEPIAK
QVRAIVRCARPAQAA

Specific function: Unknown

COG id: COG0547

COG function: function code E; Anthranilate phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1787019, Length=299, Percent_Identity=38.7959866220736, Blast_Score=194, Evalue=9e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000312
- InterPro:   IPR017459
- InterPro:   IPR020072 [H]

Pfam domain/function: PF02885 Glycos_trans_3N [H]

EC number: NA

Molecular weight: Translated: 36457; Mature: 36326

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPPILPDTAAEDALANAPFPAARFIKEIGRGADGARALVKHDARALFTAMLESRISDV
CCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QLGAILMAYRIKGETPEELDGMLEATHAHCRPLPAPDTPEHALPVVIPSYNGARRQPNLV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCHH
PLLAKLLAREGVPVLVHGIRRFDGRVTTAALFEALGWPLCEHMDDARERLERDRLAYVPI
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEECCH
DVLSPELTALLDKREIVGLRNSAHTVVKMLQPVGGHAPHEALRLVSYTHPEYRDTLTDYF
HHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH
LRHPANVLLARGTEGEAVADARRGSAVEWLHDGAHETVIEAVEGSSDAPPELPVGTDVAA
HHCCCCEEEECCCCCCHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHH
TARWIEAVLDGKQPVPEPIAKQVRAIVRCARPAQAA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PAPPILPDTAAEDALANAPFPAARFIKEIGRGADGARALVKHDARALFTAMLESRISDV
CCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QLGAILMAYRIKGETPEELDGMLEATHAHCRPLPAPDTPEHALPVVIPSYNGARRQPNLV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCHH
PLLAKLLAREGVPVLVHGIRRFDGRVTTAALFEALGWPLCEHMDDARERLERDRLAYVPI
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEECCH
DVLSPELTALLDKREIVGLRNSAHTVVKMLQPVGGHAPHEALRLVSYTHPEYRDTLTDYF
HHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH
LRHPANVLLARGTEGEAVADARRGSAVEWLHDGAHETVIEAVEGSSDAPPELPVGTDVAA
HHCCCCEEEECCCCCCHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHH
TARWIEAVLDGKQPVPEPIAKQVRAIVRCARPAQAA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503 [H]