Click here to switch to the map view.

The map label for this gene is yibN [C]

Identifier: 187927318

GI number: 187927318

Start: 228261

End: 228683

Strand: Direct

Name: yibN [C]

Synonym: Rpic_0210

Alternate gene names: 187927318

Gene position: 228261-228683 (Clockwise)

Preceding gene: 187927314

Following gene: 187927319

Centisome position: 5.79

GC content: 63.36

Gene sequence:

>423_bases
GTGAAGTTCTTCGCCGATTACAACAACCTCGCACTGCTTGCCGTCGCCATCGTTTCGGGTCTGCTGCTGCTCTGGGCGCC
CATCCAGCGCCGCATTGCGGGCGGCGGTGGCGCCAAGGTAGGTGCTTCGGCGGCCACCCAGCTCATCAATCGCCGCAATG
CTGTGGTGGTGGATGTGCGTGAAAACGCTGAATACGCCGCCGGCCATCTGCCGCAAGCCAAGCACGCGCCGCTTGGGGAG
CTTGCAGGCAAGGCTGCCGGGCTTGCAAAGAACAAAGAGACCCCCATCATCCTCGTGTGCCAGACCGGCCAGCGCGCTGG
GCGGGCCCAAGCAGTCCTGAAGCAGGCCGGTTACAGTGAGGTGTATTCGCTGGAGGGCGGATTGGCCGCCTGGCAACAAG
CTGGCCTTCCGGTTGTGAAATAA

Upstream 100 bases:

>100_bases
AAACCGACTATTTTATAATGCCGCGGGCATTGGGCCCCCGAATCGTTCGGCTGATATTCGCCCAGTAGACTTGCTCGACC
CATCCCAGGAAACCGATACC

Downstream 100 bases:

>100_bases
AGAAACGAGGTTGAAGTTATGGCGCACGTGGTCATGTACAGCACCACCGTCTGCCCCTATTGCGTGGCAGCGGAACGACT
CCTGAAGCAGCGCGGTGTTG

Product: Rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKFFADYNNLALLAVAIVSGLLLLWAPIQRRIAGGGGAKVGASAATQLINRRNAVVVDVRENAEYAAGHLPQAKHAPLGE
LAGKAAGLAKNKETPIILVCQTGQRAGRAQAVLKQAGYSEVYSLEGGLAAWQQAGLPVVK

Sequences:

>Translated_140_residues
MKFFADYNNLALLAVAIVSGLLLLWAPIQRRIAGGGGAKVGASAATQLINRRNAVVVDVRENAEYAAGHLPQAKHAPLGE
LAGKAAGLAKNKETPIILVCQTGQRAGRAQAVLKQAGYSEVYSLEGGLAAWQQAGLPVVK
>Mature_140_residues
MKFFADYNNLALLAVAIVSGLLLLWAPIQRRIAGGGGAKVGASAATQLINRRNAVVVDVRENAEYAAGHLPQAKHAPLGE
LAGKAAGLAKNKETPIILVCQTGQRAGRAQAVLKQAGYSEVYSLEGGLAAWQQAGLPVVK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=97, Percent_Identity=34.020618556701, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1789831, Length=95, Percent_Identity=34.7368421052632, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021309
- InterPro:   IPR001763 [H]

Pfam domain/function: PF11127 DUF2892; PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 14569; Mature: 14569

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFADYNNLALLAVAIVSGLLLLWAPIQRRIAGGGGAKVGASAATQLINRRNAVVVDVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEC
ENAEYAAGHLPQAKHAPLGELAGKAAGLAKNKETPIILVCQTGQRAGRAQAVLKQAGYSE
CCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCHH
VYSLEGGLAAWQQAGLPVVK
HHHCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MKFFADYNNLALLAVAIVSGLLLLWAPIQRRIAGGGGAKVGASAATQLINRRNAVVVDVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEC
ENAEYAAGHLPQAKHAPLGELAGKAAGLAKNKETPIILVCQTGQRAGRAQAVLKQAGYSE
CCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCHH
VYSLEGGLAAWQQAGLPVVK
HHHCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]