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The map label for this gene is yrbE [C]

Identifier: 187927276

GI number: 187927276

Start: 185574

End: 186698

Strand: Direct

Name: yrbE [C]

Synonym: Rpic_0168

Alternate gene names: 187927276

Gene position: 185574-186698 (Clockwise)

Preceding gene: 187927272

Following gene: 187927277

Centisome position: 4.71

GC content: 65.24

Gene sequence:

>1125_bases
TTGATCACCTTCCGTACACCGCAGCTTGAGGTGCGCGTTGTCGATGGACGCTCCGTCGCCTTTCTCTCTGGCGACTGGAC
CACGCTTGCCCTGGCCGAACGCGCCGGCGTGCGCAGCGCCCGCCAGCAGATCCGCGCCGGGCTGGACAACGCCAACGCGT
GGTGCCTGACCGAAGTCGGCCGTATCGACCACTTTGGCGCGCAACTGCTCTGGCGTGCCTGGGGCAATCAGTGGCCCGAA
CATCTGGATGCCCGGCCCGACCAGCGCCGCATGCTCGATCGTGTTGCCAAGCTCGACCCCGGCGGCTGGAAGCAGCGCCT
GGCGCCCCGCATGAACCCCGTGGCGATCCTCGGCGAGGGCATGCTCGATTTTTTCGATCACGCGGGCAATGGCATCGCCA
TGGTCGGCCAGCTCGTGTTCGACCTGGGCAGGTTCGTGCGCGCGCCGCATCGCGGGCCGTGGCGCGAGATCTCCGCCAAC
ATCTACAGCACGGGCTACAAGGCGCTGGGCATCACCGCGCTGGTGGGCTTCCTGATCGGCATCGTGCTCAGCTACCTGTC
GGCCAACCAGTTGCGCGTATTCGGGGCCAGCATCTTCATCGTCAACATTTTGGGGATGGCCATCATCCGCGAGCTCGGGC
CGGTGCTGGCGGCGATTCTGGTGGCTGGGCGTTCGGGTTCAGCCATCACTGCGCAGATCGGCGTGATGCGCGTGACCGAA
GAGCTGGATGCGATGCGCGTGATGGGCATCTCGCACGGTTTCCGCCTGATCCTGCCCAAGGTGATTGCGCTGGCGATTGC
CATGCCGCTGCTGGTGGCGTGGACGGATCTACTCGCGCTGGCGGGCGGTATTCTCGCGGCCAAGTTCCAGCTCGACATCA
GCCCGACGTATTTCATCACCTCGTTGCCCGATGCTGTGCCGGTGGCCAACCTGTGGCTCGGCATTGGCAAGGGCGTGGTG
TTTGGCATGCTGATCGCGCTGGTGGCCTGCCACTTCGGCCTGCGCATCCAGCCCAACACGCAGAGCCTGGGCGAGGGCAC
GACGACGTCCGTCGTGGTGTCGATCACCATCGTCATCCTGGCAGACGCGGTGTTTGCCATCCTCTTCAAGGACGTCGGGA
TATGA

Upstream 100 bases:

>100_bases
ACGCAAAGGCCTCACAGTGTGGCAGCCAGTGTGACAGTGTTTGGCGACGCGTTGGCTACAATTCGACCGATAGCCGGCAT
CACCGCTTACGGAGACCCGT

Downstream 100 bases:

>100_bases
CGCGGCCCCGCCATCCTCACATCAAGCACGCAGCGGAACCGGCGGCAATTACGCCCGCGCGCGAACGCGTGATCGAGATG
CGCAACGTCACCAAGCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MITFRTPQLEVRVVDGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAWGNQWPE
HLDARPDQRRMLDRVAKLDPGGWKQRLAPRMNPVAILGEGMLDFFDHAGNGIAMVGQLVFDLGRFVRAPHRGPWREISAN
IYSTGYKALGITALVGFLIGIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTE
ELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLPDAVPVANLWLGIGKGVV
FGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADAVFAILFKDVGI

Sequences:

>Translated_374_residues
MITFRTPQLEVRVVDGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAWGNQWPE
HLDARPDQRRMLDRVAKLDPGGWKQRLAPRMNPVAILGEGMLDFFDHAGNGIAMVGQLVFDLGRFVRAPHRGPWREISAN
IYSTGYKALGITALVGFLIGIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTE
ELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLPDAVPVANLWLGIGKGVV
FGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADAVFAILFKDVGI
>Mature_374_residues
MITFRTPQLEVRVVDGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAWGNQWPE
HLDARPDQRRMLDRVAKLDPGGWKQRLAPRMNPVAILGEGMLDFFDHAGNGIAMVGQLVFDLGRFVRAPHRGPWREISAN
IYSTGYKALGITALVGFLIGIVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTE
ELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLPDAVPVANLWLGIGKGVV
FGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADAVFAILFKDVGI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=214, Percent_Identity=31.7757009345794, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40409; Mature: 40409

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFRTPQLEVRVVDGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVG
CCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHC
RIDHFGAQLLWRAWGNQWPEHLDARPDQRRMLDRVAKLDPGGWKQRLAPRMNPVAILGEG
CHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEECCH
MLDFFDHAGNGIAMVGQLVFDLGRFVRAPHRGPWREISANIYSTGYKALGITALVGFLIG
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
IVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
ELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFIT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCEEEE
SLPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHH
ADAVFAILFKDVGI
HHHHHHHHHHHCCC
>Mature Secondary Structure
MITFRTPQLEVRVVDGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVG
CCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHC
RIDHFGAQLLWRAWGNQWPEHLDARPDQRRMLDRVAKLDPGGWKQRLAPRMNPVAILGEG
CHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEECCH
MLDFFDHAGNGIAMVGQLVFDLGRFVRAPHRGPWREISANIYSTGYKALGITALVGFLIG
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
IVLSYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
ELDAMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFIT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCEEEE
SLPDAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHH
ADAVFAILFKDVGI
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]