Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927271
Identifier: 187927271
GI number: 187927271
Start: 181310
End: 182164
Strand: Direct
Name: 187927271
Synonym: Rpic_0163
Alternate gene names: NA
Gene position: 181310-182164 (Clockwise)
Preceding gene: 187927269
Following gene: 187927272
Centisome position: 4.6
GC content: 60.12
Gene sequence:
>855_bases ATGCTCTATCCCGAATTGTTCAAGTCGTTGGAAGCGGTCCGCTGGAATATGGAAAAGGATATTCCGTGGGACACGTTCGA TGCGTCGCTGCTGACCGACGCGCAAGCGCAGACCATCAAGATGAATGCCATCACCGAGTGGTCAGCCCTACCGGCCACCG AGATGTTCCTGCGTGACAATCGTCACGACTCCGATTTTTCGGCGTTCATGAGCGTGTGGTTCTTTGAAGAGCAGAAGCAT TCGCTGGTGCTGATGGAGTATCTGCGCCGCTTCCGCCCGGAGCTCGTGCCGACCGAAGAAGAGCTGCACAACGTGCGCTT TGAATTCGATCCGGCCCCGCCGCTGGAAACGCTGATGCTCCACTTCTGCGGCGAAATCCGTCTGAACCACTGGTACCGCC GTGCCTCCGAATGGCACACCGAGCCGGTCATCAAGGCGATCTACAAGCATCTGTCGCAGGACGAAGCCCGCCACGGCGGC GCCTACCTGCGCTACATGAAGAAATACCTCGGCCAGTTCGGCGACAGCGCGCGCAGCGCATTCGCCAAGATCGGCGTGCT GATGGCCTCGGCGCGTCGCACCGAAAAGCCGCTCCACCCGACCAACCTGCACGTGAACAAGGCGCTGTTCCCGCAAGACA CCGTGCAGTCGCGCCTGCCGAACCCGGATTGGCTGGAGCACTGGCTTGACGAGCAGATCAAGTTCGACGCCGGCTGGGAA AAGAAGGTCATCGAGCGCATCCTGCACAACATGGGTCTGCTGTTCGAGCGCACCTTCGAAACCGTGCAAGACCTGAACCG CTACCGCAAGGAACTGAACGCACGTCTGCTCGGCTCGGCCGAACAAGCTGCCTGA
Upstream 100 bases:
>100_bases AGGAAACGGGCAGACCGAGAACTTTGCTCCGGCAACCCCGAAAATCGGGGGCTGGTCAAGCATGTCTGCTAGAATCCGCC TGCAAATTCAAAGGCTTACC
Downstream 100 bases:
>100_bases TCCTTGCCATTGGCAGCAAGCGGCCCATCGATTCGATGGGCCGTTTTGTTTTCCACCCCGATTTCGGATCCACCATGACC GCTCGCCAGCCCGCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase Component Of ABC Transporter
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MLYPELFKSLEAVRWNMEKDIPWDTFDASLLTDAQAQTIKMNAITEWSALPATEMFLRDNRHDSDFSAFMSVWFFEEQKH SLVLMEYLRRFRPELVPTEEELHNVRFEFDPAPPLETLMLHFCGEIRLNHWYRRASEWHTEPVIKAIYKHLSQDEARHGG AYLRYMKKYLGQFGDSARSAFAKIGVLMASARRTEKPLHPTNLHVNKALFPQDTVQSRLPNPDWLEHWLDEQIKFDAGWE KKVIERILHNMGLLFERTFETVQDLNRYRKELNARLLGSAEQAA
Sequences:
>Translated_284_residues MLYPELFKSLEAVRWNMEKDIPWDTFDASLLTDAQAQTIKMNAITEWSALPATEMFLRDNRHDSDFSAFMSVWFFEEQKH SLVLMEYLRRFRPELVPTEEELHNVRFEFDPAPPLETLMLHFCGEIRLNHWYRRASEWHTEPVIKAIYKHLSQDEARHGG AYLRYMKKYLGQFGDSARSAFAKIGVLMASARRTEKPLHPTNLHVNKALFPQDTVQSRLPNPDWLEHWLDEQIKFDAGWE KKVIERILHNMGLLFERTFETVQDLNRYRKELNARLLGSAEQAA >Mature_284_residues MLYPELFKSLEAVRWNMEKDIPWDTFDASLLTDAQAQTIKMNAITEWSALPATEMFLRDNRHDSDFSAFMSVWFFEEQKH SLVLMEYLRRFRPELVPTEEELHNVRFEFDPAPPLETLMLHFCGEIRLNHWYRRASEWHTEPVIKAIYKHLSQDEARHGG AYLRYMKKYLGQFGDSARSAFAKIGVLMASARRTEKPLHPTNLHVNKALFPQDTVQSRLPNPDWLEHWLDEQIKFDAGWE KKVIERILHNMGLLFERTFETVQDLNRYRKELNARLLGSAEQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33583; Mature: 33583
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYPELFKSLEAVRWNMEKDIPWDTFDASLLTDAQAQTIKMNAITEWSALPATEMFLRDN CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHEEEEHHHHHHHCCCHHHHHHHCC RHDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPELVPTEEELHNVRFEFDPAPPLETLML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEECCCCCCHHHHHH HFCGEIRLNHWYRRASEWHTEPVIKAIYKHLSQDEARHGGAYLRYMKKYLGQFGDSARSA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH FAKIGVLMASARRTEKPLHPTNLHVNKALFPQDTVQSRLPNPDWLEHWLDEQIKFDAGWE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCHH KKVIERILHNMGLLFERTFETVQDLNRYRKELNARLLGSAEQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MLYPELFKSLEAVRWNMEKDIPWDTFDASLLTDAQAQTIKMNAITEWSALPATEMFLRDN CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHEEEEHHHHHHHCCCHHHHHHHCC RHDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPELVPTEEELHNVRFEFDPAPPLETLML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEECCCCCCHHHHHH HFCGEIRLNHWYRRASEWHTEPVIKAIYKHLSQDEARHGGAYLRYMKKYLGQFGDSARSA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH FAKIGVLMASARRTEKPLHPTNLHVNKALFPQDTVQSRLPNPDWLEHWLDEQIKFDAGWE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCHH KKVIERILHNMGLLFERTFETVQDLNRYRKELNARLLGSAEQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA