Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927268
Identifier: 187927268
GI number: 187927268
Start: 178129
End: 179022
Strand: Direct
Name: 187927268
Synonym: Rpic_0160
Alternate gene names: NA
Gene position: 178129-179022 (Clockwise)
Preceding gene: 187927267
Following gene: 187927269
Centisome position: 4.52
GC content: 68.01
Gene sequence:
>894_bases ATGTTCACCCAGATGCCCAATTTTGCCGAAGGCGGTTTCGATTTCCTGCGCAAGCTGTGGGGCGGCGGCTTTTCCGGGAT GGCCGGTGGCGGCATGCCCAACATGGCGAGCTTTGCCGCGCCGCCGATGGACCTTGAGGAAATCGACAAGCGTATCCACG ACCTGCGCGCGGTGGAGAGTTGGCTGCAACTGAACGCCAGCCTGCTGCGTACGGCAATTCAGGGCCTGGAGGTGCAGCGC GCCACGTTGGTGGCCTTGCAGACGTTCGGCTCCGCACTGTCGCCCGAGGCCATGAAGTCTGCGTTCGACGGCCTGACGCC GAGCGCGTCGTCGTCTTCATCTTCGTCGTCTTCCGGCGAGGAATCCAAACCTGCCTGGCCCCACACCGCCGCCACAGCCA AGCCGGACGACGAACCGCCGCCCGAAGACGAGGACGAGGCGGAAGAAGACACGGACGACGATCAGGCCGAAGCCCGCGCC GAGGCTGCCCACGCTCAGGCACAGGCCGCTGCGCAGGCGCAAGCGGCCGCACGCGCCGCCGCGGCTGCGCTGGACCCCTC GCCGTGGTGGAACATGCTGCAGCAGCAGTTCAACCAGATCGCCAGCTCTGCCGCCGCCGCCATGCCGATGCCGCAGAACC TGATGCCGGGCTTCCCGGGCGGCTTCCCCGGGTTTGGCGGCGCCCCGGGCGCGGAAGGGCTCGATGCGGCGCCGGAAGAT ATCGAAGAGCCGACAGCGCCAGCCAAGCCCAAGCGCGCTGCCGCCAAGGCTATGCCGAAGCCGGCCGCCAAGGCGTCTGC AGGGCGCACAGCCAAGCCGGCCACCAAGAAGACTGCTGCCAAGAAAGCGCCGGCGAAATCTGTGCCGCGCAAGCCCACCA ACGACACCCCCTGA
Upstream 100 bases:
>100_bases CGAGCCTGCGCCAGAAGCGTCCGCCCACGTTTGATGGCGCCTGATTGAAGATGAAGACACGCATGCGCGCCCGCCCCCCG ACCGATTTGTAGGAGACACC
Downstream 100 bases:
>100_bases TCGATGTCGACAGACTGCACTGCACTCTTGATGATGGGCGGCGGTGCGCGTGCCGCCTATCAGGTCGGAGTGCTGCGCGG CATCGCGGGGTTGGCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MFTQMPNFAEGGFDFLRKLWGGGFSGMAGGGMPNMASFAAPPMDLEEIDKRIHDLRAVESWLQLNASLLRTAIQGLEVQR ATLVALQTFGSALSPEAMKSAFDGLTPSASSSSSSSSSGEESKPAWPHTAATAKPDDEPPPEDEDEAEEDTDDDQAEARA EAAHAQAQAAAQAQAAARAAAAALDPSPWWNMLQQQFNQIASSAAAAMPMPQNLMPGFPGGFPGFGGAPGAEGLDAAPED IEEPTAPAKPKRAAAKAMPKPAAKASAGRTAKPATKKTAAKKAPAKSVPRKPTNDTP
Sequences:
>Translated_297_residues MFTQMPNFAEGGFDFLRKLWGGGFSGMAGGGMPNMASFAAPPMDLEEIDKRIHDLRAVESWLQLNASLLRTAIQGLEVQR ATLVALQTFGSALSPEAMKSAFDGLTPSASSSSSSSSSGEESKPAWPHTAATAKPDDEPPPEDEDEAEEDTDDDQAEARA EAAHAQAQAAAQAQAAARAAAAALDPSPWWNMLQQQFNQIASSAAAAMPMPQNLMPGFPGGFPGFGGAPGAEGLDAAPED IEEPTAPAKPKRAAAKAMPKPAAKASAGRTAKPATKKTAAKKAPAKSVPRKPTNDTP >Mature_297_residues MFTQMPNFAEGGFDFLRKLWGGGFSGMAGGGMPNMASFAAPPMDLEEIDKRIHDLRAVESWLQLNASLLRTAIQGLEVQR ATLVALQTFGSALSPEAMKSAFDGLTPSASSSSSSSSSGEESKPAWPHTAATAKPDDEPPPEDEDEAEEDTDDDQAEARA EAAHAQAQAAAQAQAAARAAAAALDPSPWWNMLQQQFNQIASSAAAAMPMPQNLMPGFPGGFPGFGGAPGAEGLDAAPED IEEPTAPAKPKRAAAKAMPKPAAKASAGRTAKPATKKTAAKKAPAKSVPRKPTNDTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30749; Mature: 30749
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTQMPNFAEGGFDFLRKLWGGGFSGMAGGGMPNMASFAAPPMDLEEIDKRIHDLRAVES CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH WLQLNASLLRTAIQGLEVQRATLVALQTFGSALSPEAMKSAFDGLTPSASSSSSSSSSGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC ESKPAWPHTAATAKPDDEPPPEDEDEAEEDTDDDQAEARAEAAHAQAQAAAQAQAAARAA CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAALDPSPWWNMLQQQFNQIASSAAAAMPMPQNLMPGFPGGFPGFGGAPGAEGLDAAPED HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHH IEEPTAPAKPKRAAAKAMPKPAAKASAGRTAKPATKKTAAKKAPAKSVPRKPTNDTP HHCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCC >Mature Secondary Structure MFTQMPNFAEGGFDFLRKLWGGGFSGMAGGGMPNMASFAAPPMDLEEIDKRIHDLRAVES CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH WLQLNASLLRTAIQGLEVQRATLVALQTFGSALSPEAMKSAFDGLTPSASSSSSSSSSGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC ESKPAWPHTAATAKPDDEPPPEDEDEAEEDTDDDQAEARAEAAHAQAQAAAQAQAAARAA CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAALDPSPWWNMLQQQFNQIASSAAAAMPMPQNLMPGFPGGFPGFGGAPGAEGLDAAPED HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHH IEEPTAPAKPKRAAAKAMPKPAAKASAGRTAKPATKKTAAKKAPAKSVPRKPTNDTP HHCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA