Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927244
Identifier: 187927244
GI number: 187927244
Start: 156017
End: 156727
Strand: Reverse
Name: 187927244
Synonym: Rpic_0136
Alternate gene names: NA
Gene position: 156727-156017 (Counterclockwise)
Preceding gene: 187927245
Following gene: 187927243
Centisome position: 3.98
GC content: 66.53
Gene sequence:
>711_bases ATGGCACGCAATACGCAATTTTCCCGTGCCCGCTCGCAACGGGGCGGCACGTTTCTGGGTCTGGTGCTGGGCTTGATCGT CGGTTTGGCGATCGCCGTGGTGGTGGCGGTGTACATCACCAAGGCGCCGGTGCCCTTCGTGTCGCGTGGCGGCGCGCAAC CCAAGCCGAGCGAAGCGGGCAACGTGGTCAACACGCTGCCGACGCCGGTGCAGCCCGCGCCGCAAGCCAGCGCGCCGCAG GCAGCAGACCCGAACGCGCCGTTGTGGAGCCGTGTGCCGGCCAAGCCGGTCGATCAGGCCGCCGAGCAGAACAATCCGCC GCCGGGCATCACGATCCACCCGGCCCAGCCAGGTTCGGTCCCGCAGGTGGCAAGCGCACCGGCCGTCAAGCCACCCAAGC CTCCGGTTACCGCCTCGAACGAGAAGCCGGTGACGGACCCGATTGCCGAGATTGCCCGCCAGGATGCAGCCAAGACAGGC TACTTCCTGCAAGTGGGCGCTTACAAATCGCCCGAAGATGCCGAGCGTCAGAAGGGCAATCTCGCCATGCAAGGCTTTGA AGCCAAGGTGACGCAGCGCGAGGTGAACGGCACCACGATGTATCGCGTGCGCCTGGGGCCGTTCAATTCGCTGGATGAGA TGACCGCCGTGCGCGGCCGCCTGCAGTCGACGGGCGTGGAATCGTCGGTCATTCGCTTCGCTCGCCAGTAA
Upstream 100 bases:
>100_bases GCTGGCGGTGATCGGCGTGTCCGCGCCGCAAAAGATGTAAACGCGCACGATTTGGCATCACACGGCGCTCTTATAATCGG GCGCTTCTAGAAGGATCGAC
Downstream 100 bases:
>100_bases CGTCAAGTCGTGCAGCCCGCTGTGAACCCGGCGGGCTGTGATCGGTCAGAAACCTCAGTCTCAGTTACGCTGACAGCGGC ATCTGTCGGTTCTGCACTGG
Product: Sporulation domain-containing protein
Products: NA
Alternate protein names: Sporulation Domain Protein; Sporulation ; Sporulation Related Protein; Protein FtsN; Repeat Protein; Sporulation Related Domain-Containing
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MARNTQFSRARSQRGGTFLGLVLGLIVGLAIAVVVAVYITKAPVPFVSRGGAQPKPSEAGNVVNTLPTPVQPAPQASAPQ AADPNAPLWSRVPAKPVDQAAEQNNPPPGITIHPAQPGSVPQVASAPAVKPPKPPVTASNEKPVTDPIAEIARQDAAKTG YFLQVGAYKSPEDAERQKGNLAMQGFEAKVTQREVNGTTMYRVRLGPFNSLDEMTAVRGRLQSTGVESSVIRFARQ
Sequences:
>Translated_236_residues MARNTQFSRARSQRGGTFLGLVLGLIVGLAIAVVVAVYITKAPVPFVSRGGAQPKPSEAGNVVNTLPTPVQPAPQASAPQ AADPNAPLWSRVPAKPVDQAAEQNNPPPGITIHPAQPGSVPQVASAPAVKPPKPPVTASNEKPVTDPIAEIARQDAAKTG YFLQVGAYKSPEDAERQKGNLAMQGFEAKVTQREVNGTTMYRVRLGPFNSLDEMTAVRGRLQSTGVESSVIRFARQ >Mature_235_residues ARNTQFSRARSQRGGTFLGLVLGLIVGLAIAVVVAVYITKAPVPFVSRGGAQPKPSEAGNVVNTLPTPVQPAPQASAPQA ADPNAPLWSRVPAKPVDQAAEQNNPPPGITIHPAQPGSVPQVASAPAVKPPKPPVTASNEKPVTDPIAEIARQDAAKTGY FLQVGAYKSPEDAERQKGNLAMQGFEAKVTQREVNGTTMYRVRLGPFNSLDEMTAVRGRLQSTGVESSVIRFARQ
Specific function: Unknown
COG id: COG3087
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24872; Mature: 24740
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNTQFSRARSQRGGTFLGLVLGLIVGLAIAVVVAVYITKAPVPFVSRGGAQPKPSEAG CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC NVVNTLPTPVQPAPQASAPQAADPNAPLWSRVPAKPVDQAAEQNNPPPGITIHPAQPGSV CCHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHCCCCCCCEEECCCCCCCC PQVASAPAVKPPKPPVTASNEKPVTDPIAEIARQDAAKTGYFLQVGAYKSPEDAERQKGN CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCC LAMQGFEAKVTQREVNGTTMYRVRLGPFNSLDEMTAVRGRLQSTGVESSVIRFARQ EEECCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure ARNTQFSRARSQRGGTFLGLVLGLIVGLAIAVVVAVYITKAPVPFVSRGGAQPKPSEAG CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC NVVNTLPTPVQPAPQASAPQAADPNAPLWSRVPAKPVDQAAEQNNPPPGITIHPAQPGSV CCHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHCCCCCCCEEECCCCCCCC PQVASAPAVKPPKPPVTASNEKPVTDPIAEIARQDAAKTGYFLQVGAYKSPEDAERQKGN CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCC LAMQGFEAKVTQREVNGTTMYRVRLGPFNSLDEMTAVRGRLQSTGVESSVIRFARQ EEECCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA