Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is yqjZ [H]
Identifier: 187927240
GI number: 187927240
Start: 152993
End: 153379
Strand: Direct
Name: yqjZ [H]
Synonym: Rpic_0132
Alternate gene names: 187927240
Gene position: 152993-153379 (Clockwise)
Preceding gene: 187927239
Following gene: 187927246
Centisome position: 3.88
GC content: 63.57
Gene sequence:
>387_bases ATGGCTGACCAGCATGACGTTCTCGACGACAGCGCCGTCGTCCTGCCGTTTCCCGCGCAAACGCCGACTGCGCCGTATTA CGCGGTGATTTTTTCCTCCACGCGCACCGACGGCGACAATGGCTACGGCGCCATGGCCGACCGCATGGTGGAGTTGGGCC GCAGTATGCCGGGGTTTCTCGGCATCGAGTCCGTGCGCGATGAGCTGGCCGGCGATCAGGGGCGGCCGGGCATCACCGTG TCGTATTGGTCGTCGCTGGAGGCCATTCGCGAGTGGAAGAACCAGAGCGACCACCTTGCCGCCCAGAAGCTGGGGCGTGA GCAGTGGTATGCGTCGTACCACCTGCGCATTGCCAAGGTCGAGTACGACTATGGGTTCGAGCGATAA
Upstream 100 bases:
>100_bases CATCAAGGCGAACTGGTGCGCGAAACCGACGCGGACGGTATCGTTCGATTCCACGCAGCTGCATAAACCGCACGACCCGT GCCTTTCAACGGAGCCGCCC
Downstream 100 bases:
>100_bases CGTATCGCTGCGGCCAACAAGAAACCCGCCGACCGGCGGGTTTTTTTTCGGCCTGAAACTTGGCCCTAACGCAGCGTCTT CGCAAATTGCCCCAGATACC
Product: Antibiotic biosynthesis monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MADQHDVLDDSAVVLPFPAQTPTAPYYAVIFSSTRTDGDNGYGAMADRMVELGRSMPGFLGIESVRDELAGDQGRPGITV SYWSSLEAIREWKNQSDHLAAQKLGREQWYASYHLRIAKVEYDYGFER
Sequences:
>Translated_128_residues MADQHDVLDDSAVVLPFPAQTPTAPYYAVIFSSTRTDGDNGYGAMADRMVELGRSMPGFLGIESVRDELAGDQGRPGITV SYWSSLEAIREWKNQSDHLAAQKLGREQWYASYHLRIAKVEYDYGFER >Mature_127_residues ADQHDVLDDSAVVLPFPAQTPTAPYYAVIFSSTRTDGDNGYGAMADRMVELGRSMPGFLGIESVRDELAGDQGRPGITVS YWSSLEAIREWKNQSDHLAAQKLGREQWYASYHLRIAKVEYDYGFER
Specific function: Unknown
COG id: COG2329
COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007138 - InterPro: IPR011008 [H]
Pfam domain/function: PF03992 ABM [H]
EC number: NA
Molecular weight: Translated: 14381; Mature: 14250
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQHDVLDDSAVVLPFPAQTPTAPYYAVIFSSTRTDGDNGYGAMADRMVELGRSMPGFL CCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCC GIESVRDELAGDQGRPGITVSYWSSLEAIREWKNQSDHLAAQKLGREQWYASYHLRIAKV CHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHEEEEEEEEE EYDYGFER ECCCCCCC >Mature Secondary Structure ADQHDVLDDSAVVLPFPAQTPTAPYYAVIFSSTRTDGDNGYGAMADRMVELGRSMPGFL CCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCC GIESVRDELAGDQGRPGITVSYWSSLEAIREWKNQSDHLAAQKLGREQWYASYHLRIAKV CHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHEEEEEEEEE EYDYGFER ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]