Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927186
Identifier: 187927186
GI number: 187927186
Start: 88182
End: 88436
Strand: Direct
Name: 187927186
Synonym: Rpic_0076
Alternate gene names: NA
Gene position: 88182-88436 (Clockwise)
Preceding gene: 187927185
Following gene: 187927195
Centisome position: 2.24
GC content: 67.06
Gene sequence:
>255_bases GTGAGCGCCCCTAACGCAATCCGCCAGTTTCACCGCTGGGTGTCGATGGCGTTCACGCTCACCGTCATCGCCAACTTTGT CGCCATGGGGGTGGGCAAGGGGGCGCAGCCGCCTGCGTGGATCACCTATGCGCCGCTGCTGCCGCTGGCGTTGCTGCTAT TCACGGGGCTCTATCTGTTTGCGCTGCCGTACCTGGATCGGCGGGGTGCTCGGCGTTCGACCGGTGATCGGGGGGCGCCC ACCGCGGCCATCTGA
Upstream 100 bases:
>100_bases TCACGCAGGAGCCCATCGACCGCTTCGGCAGCGTCGACGCCGGTTTTCGTGACCCGGCCGGCAACGGCTGGAAGATGATC CAGGCCGCCGGAGGTGCACA
Downstream 100 bases:
>100_bases GCGTGGCGCGTGAGGCTCTGAGGCCCGATTGCCGAGCTCAGACTGTCGAGCGTGAGCCTCGAAGGCTTGGGCACCAAGCT CAACGCCCGGAGCATGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSAPNAIRQFHRWVSMAFTLTVIANFVAMGVGKGAQPPAWITYAPLLPLALLLFTGLYLFALPYLDRRGARRSTGDRGAP TAAI
Sequences:
>Translated_84_residues MSAPNAIRQFHRWVSMAFTLTVIANFVAMGVGKGAQPPAWITYAPLLPLALLLFTGLYLFALPYLDRRGARRSTGDRGAP TAAI >Mature_83_residues SAPNAIRQFHRWVSMAFTLTVIANFVAMGVGKGAQPPAWITYAPLLPLALLLFTGLYLFALPYLDRRGARRSTGDRGAPT AAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9119; Mature: 8988
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPNAIRQFHRWVSMAFTLTVIANFVAMGVGKGAQPPAWITYAPLLPLALLLFTGLYLF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ALPYLDRRGARRSTGDRGAPTAAI HHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAPNAIRQFHRWVSMAFTLTVIANFVAMGVGKGAQPPAWITYAPLLPLALLLFTGLYLF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ALPYLDRRGARRSTGDRGAPTAAI HHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA