Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927132
Identifier: 187927132
GI number: 187927132
Start: 33286
End: 33957
Strand: Reverse
Name: 187927132
Synonym: Rpic_0022
Alternate gene names: NA
Gene position: 33957-33286 (Counterclockwise)
Preceding gene: 187927133
Following gene: 187927125
Centisome position: 0.86
GC content: 70.39
Gene sequence:
>672_bases ATGCCACTCATCAGCCGCGCCCACGTCCGTCTCTCGCGCCTGCGCTTTCCGTTTGCGGTGCGCGTGCAGTCCGAGCAGGG CACCGTATGCCTGCGCGATGCCAACGGCCGGCGCGAAGTGCGCCCGGGCAATCCGTTCGTGGTGCCCGCCTTCGCGCATT TCGGTTGCGAGATTCCGGGCACCGTGTGGCAGCCGTGCGCCATCACGTTCAAGGCCGTGCCCGACGCCGGCTGCCCCCGC ATGGCCGCCATTCAGCATGACAAGCCCTGGGCGCGCGCATTCGCCACGCTGGTGTTCGAACACCCCGTGCAGGCGTGGAA CGCCGCGCTGCTGAGCCACTGCTGGCAGGCCTGCCCGCGCCAGGTGCGTGCGCGTCTGTTTGCGGAAGGGGAAGCACTGC ATGCGCTGGTGCGCGAGCAACGCGCCGCCTGGGCGCTGTACCGGCTGGCGCACACGTGCGGCAATGACGAGCCCGAAGCT GAAGCGCTGCACGCGCTGGCCCGGCGGGCCGGCCTCCGCAACGCGCGCACGCTGAACGAAACGTGCGCAAGCCTGTTCGG GGTGGAGCTGGCTGCCCTGCTGGCGGGCAACGCAGATTCGGTCAGCGGTTTGGTGCACGGCAGCACCGCCCCGTTGGAGC GGTGGGCGCAGCCGCTGGCGATGGCCCTTTAA
Upstream 100 bases:
>100_bases GCCGCGCCCGACTCTGTCACCCGGGCGACATTGCCCCTGTTACGCACAGACATAGAATCCTGCAACAGTCGCGCTTCATC CGCCGCCTTATCGGTCAGCC
Downstream 100 bases:
>100_bases GCGCTGCGCCGCAACCGCGGCATCAATCGAAGATCACCCCACGCCGCACGCCCGCACGCGGCAGCGGGCTCGGCTCGCCA AGGATGTCGAGCACCGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MPLISRAHVRLSRLRFPFAVRVQSEQGTVCLRDANGRREVRPGNPFVVPAFAHFGCEIPGTVWQPCAITFKAVPDAGCPR MAAIQHDKPWARAFATLVFEHPVQAWNAALLSHCWQACPRQVRARLFAEGEALHALVREQRAAWALYRLAHTCGNDEPEA EALHALARRAGLRNARTLNETCASLFGVELAALLAGNADSVSGLVHGSTAPLERWAQPLAMAL
Sequences:
>Translated_223_residues MPLISRAHVRLSRLRFPFAVRVQSEQGTVCLRDANGRREVRPGNPFVVPAFAHFGCEIPGTVWQPCAITFKAVPDAGCPR MAAIQHDKPWARAFATLVFEHPVQAWNAALLSHCWQACPRQVRARLFAEGEALHALVREQRAAWALYRLAHTCGNDEPEA EALHALARRAGLRNARTLNETCASLFGVELAALLAGNADSVSGLVHGSTAPLERWAQPLAMAL >Mature_222_residues PLISRAHVRLSRLRFPFAVRVQSEQGTVCLRDANGRREVRPGNPFVVPAFAHFGCEIPGTVWQPCAITFKAVPDAGCPRM AAIQHDKPWARAFATLVFEHPVQAWNAALLSHCWQACPRQVRARLFAEGEALHALVREQRAAWALYRLAHTCGNDEPEAE ALHALARRAGLRNARTLNETCASLFGVELAALLAGNADSVSGLVHGSTAPLERWAQPLAMAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24423; Mature: 24292
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLISRAHVRLSRLRFPFAVRVQSEQGTVCLRDANGRREVRPGNPFVVPAFAHFGCEIPG CCCCHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCCCCCCCCEEEECHHHCCCCCCC TVWQPCAITFKAVPDAGCPRMAAIQHDKPWARAFATLVFEHPVQAWNAALLSHCWQACPR CCCCCCEEEEEECCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVRARLFAEGEALHALVREQRAAWALYRLAHTCGNDEPEAEALHALARRAGLRNARTLNE HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHH TCASLFGVELAALLAGNADSVSGLVHGSTAPLERWAQPLAMAL HHHHHHHHHHHHHHCCCCHHHHHEECCCCCCHHHHHHHHHHCC >Mature Secondary Structure PLISRAHVRLSRLRFPFAVRVQSEQGTVCLRDANGRREVRPGNPFVVPAFAHFGCEIPG CCCHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCCCCCCCCEEEECHHHCCCCCCC TVWQPCAITFKAVPDAGCPRMAAIQHDKPWARAFATLVFEHPVQAWNAALLSHCWQACPR CCCCCCEEEEEECCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVRARLFAEGEALHALVREQRAAWALYRLAHTCGNDEPEAEALHALARRAGLRNARTLNE HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHH TCASLFGVELAALLAGNADSVSGLVHGSTAPLERWAQPLAMAL HHHHHHHHHHHHHHCCCCHHHHHEECCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA