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The map label for this gene is yvcS [H]

Identifier: 187935727

GI number: 187935727

Start: 1150358

End: 1152247

Strand: Reverse

Name: yvcS [H]

Synonym: CLL_A1121

Alternate gene names: 187935727

Gene position: 1152247-1150358 (Counterclockwise)

Preceding gene: 187935169

Following gene: 187932840

Centisome position: 30.32

GC content: 23.97

Gene sequence:

>1890_bases
ATGAGTTTATATAACTTAGCCAAAAACAATGTAACTAAAAACCTTAAAAATTATGGTATGTATTTATTTTCACTTATTTT
TACTGTATCAATATTTGAAAGCTTCAAAACACTAGAATACTCAAATGCTGCAACTAAAAATATTTTAGGTAATTCCAACA
TGTTAATTGTATTTAATGCTTCATCCATTGTTATTAGTATATTTTCACTTATATTTATTTATTATTCAAGTAACTTTTTT
ATAAAAAAGAGGAAAAAAGAAATAGGACTTTATGCTCTTTTAGGTGTTGAAAATAAAAGAATTGCCACTCTTTTATTTTT
TGAAACCCTACTTCTTGGAATTGTTGCTTTAATTGTAGGAACCTTATTTGGAATATTATTTGCATCAATTTCTTTTTCAA
TTTTATCTAAAATATCACTTGGAAAATTTATATTTGTATTTTTATTTTCTCCTAAAGCTATTTTAATAACAATAATTACA
TTTTTAATATTTTTTATAATTATCTCTATTCAAAGTAGTACAATAATTTACAAGTATTCATTAATAGAACTATTTAAGGC
AAACAGTAAAAAGGAAGATAAGAAAAAAGCTTCAATAATTTCAGCTATTCTATCTATTGCATTTATTCTTATTGGTTACG
GAATTTATTTCTTCGCTGTCAAAGCTAATATTAGTTTTTCTTTTGTAACACTAATATTAGTTATTATAGGAACATATCTT
TTCTTTAGTTCAATGTTATTCTTTTTTGTGAAAATAAAAAGACACAACAAAAATCATTTATATAATGGAATGAATATTAT
TTCAACAAATCAATTGTTATATAGAATAAAAGGAAATAGTAGAACACTTGCAACTATTACAATTTTAACTGCTACAACAC
TTACAGCTGTTGGTACTGCTGTTGCTTTACAAATGGATTTTAATAAAAATATAACTAAAACACTTCCTTTTGGAATTGTT
ACAACTTCAACCAATGAAAACTATATAAATGACATAAAAAATATTATAAATAATTATGATAAAAATAAATTACTTTATGA
AGAATCAATTGATACTATAATGGTTAATGGAAGTACTCGAGCCTCCCATACCAATTCGTATATAGTAATTAAAGAAAGTG
AACTTAATAAACTTTTAAGTCATAATTCTTACTCAATTGATCTACCTAAACTCACTAATGAAAATGATGCATTTATATTA
AATTCATTTGATTCAGAAAGTAAAATATCAACTTTATCTTTAGATTCAAAAAATGGTCCACTTAAATTAAATATTATTGG
TAATACTTATCAAAGTTTAGTTCATCATATGTTAACTACTGTTACTATTGTTGTTAAAGACTCTACATATGAAACACTAA
ATTTAACTGAAAAAACAAACTATACAATATTAGAAATTGATAATAAAAAAGAATCGCAAGGAATAAGCAACGATATAAAA
GATCTTCAAGAAAAATATAAATCAACTTCATTAGAAAAAAATATTACCCTAACATTCTACGAAGATTATTCAGCATCCTC
TATTGATATTGGAACCATAATGTTTATTGGAATGTTTTTAGGATTAATATTCCTAGTTTGTACTGGTAGCATTATATTCT
TTAAACAAATGTCTGAAGCTGAAGAGGAAGTTAATAGATACCAAATCTTAAAGAATATTGGTGTTTCAGATAATGTCTTA
AAAACTTCTATCTTTAAGCAAGTTGGATTTGTATTTTCAGTTCCACTAATAATGGCTACAATACATAGTACAGTTGCACT
AAGCTATATTGCTTCACTATTCCACATTAGCTTAACTATATTAATGCTTTATACCATTGTTCCTTACCTAGTAATTTATT
TAATTTACTATTTTATAACTTCGATGTATTATTTTAATACTGTAAGCTAA

Upstream 100 bases:

>100_bases
AAAGATGGAGTTCTATATACGGAATTAATTCGTAAAGATAGTCAAAAAGGATTCTTCCATGAAATCATGGATACATTAAT
TTCAATTGGAGGAGAATAAA

Downstream 100 bases:

>100_bases
TGAAAAAAGAGTTGTCTTGCAAACTGTCCATTTGATGTTGGACAGTTTGCATTAAAATATGACAGCTCTTTTTCATTTAA
CATTAACTTTTATATTAATT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 628

Protein sequence:

>629_residues
MSLYNLAKNNVTKNLKNYGMYLFSLIFTVSIFESFKTLEYSNAATKNILGNSNMLIVFNASSIVISIFSLIFIYYSSNFF
IKKRKKEIGLYALLGVENKRIATLLFFETLLLGIVALIVGTLFGILFASISFSILSKISLGKFIFVFLFSPKAILITIIT
FLIFFIIISIQSSTIIYKYSLIELFKANSKKEDKKKASIISAILSIAFILIGYGIYFFAVKANISFSFVTLILVIIGTYL
FFSSMLFFFVKIKRHNKNHLYNGMNIISTNQLLYRIKGNSRTLATITILTATTLTAVGTAVALQMDFNKNITKTLPFGIV
TTSTNENYINDIKNIINNYDKNKLLYEESIDTIMVNGSTRASHTNSYIVIKESELNKLLSHNSYSIDLPKLTNENDAFIL
NSFDSESKISTLSLDSKNGPLKLNIIGNTYQSLVHHMLTTVTIVVKDSTYETLNLTEKTNYTILEIDNKKESQGISNDIK
DLQEKYKSTSLEKNITLTFYEDYSASSIDIGTIMFIGMFLGLIFLVCTGSIIFFKQMSEAEEEVNRYQILKNIGVSDNVL
KTSIFKQVGFVFSVPLIMATIHSTVALSYIASLFHISLTILMLYTIVPYLVIYLIYYFITSMYYFNTVS

Sequences:

>Translated_629_residues
MSLYNLAKNNVTKNLKNYGMYLFSLIFTVSIFESFKTLEYSNAATKNILGNSNMLIVFNASSIVISIFSLIFIYYSSNFF
IKKRKKEIGLYALLGVENKRIATLLFFETLLLGIVALIVGTLFGILFASISFSILSKISLGKFIFVFLFSPKAILITIIT
FLIFFIIISIQSSTIIYKYSLIELFKANSKKEDKKKASIISAILSIAFILIGYGIYFFAVKANISFSFVTLILVIIGTYL
FFSSMLFFFVKIKRHNKNHLYNGMNIISTNQLLYRIKGNSRTLATITILTATTLTAVGTAVALQMDFNKNITKTLPFGIV
TTSTNENYINDIKNIINNYDKNKLLYEESIDTIMVNGSTRASHTNSYIVIKESELNKLLSHNSYSIDLPKLTNENDAFIL
NSFDSESKISTLSLDSKNGPLKLNIIGNTYQSLVHHMLTTVTIVVKDSTYETLNLTEKTNYTILEIDNKKESQGISNDIK
DLQEKYKSTSLEKNITLTFYEDYSASSIDIGTIMFIGMFLGLIFLVCTGSIIFFKQMSEAEEEVNRYQILKNIGVSDNVL
KTSIFKQVGFVFSVPLIMATIHSTVALSYIASLFHISLTILMLYTIVPYLVIYLIYYFITSMYYFNTVS
>Mature_628_residues
SLYNLAKNNVTKNLKNYGMYLFSLIFTVSIFESFKTLEYSNAATKNILGNSNMLIVFNASSIVISIFSLIFIYYSSNFFI
KKRKKEIGLYALLGVENKRIATLLFFETLLLGIVALIVGTLFGILFASISFSILSKISLGKFIFVFLFSPKAILITIITF
LIFFIIISIQSSTIIYKYSLIELFKANSKKEDKKKASIISAILSIAFILIGYGIYFFAVKANISFSFVTLILVIIGTYLF
FSSMLFFFVKIKRHNKNHLYNGMNIISTNQLLYRIKGNSRTLATITILTATTLTAVGTAVALQMDFNKNITKTLPFGIVT
TSTNENYINDIKNIINNYDKNKLLYEESIDTIMVNGSTRASHTNSYIVIKESELNKLLSHNSYSIDLPKLTNENDAFILN
SFDSESKISTLSLDSKNGPLKLNIIGNTYQSLVHHMLTTVTIVVKDSTYETLNLTEKTNYTILEIDNKKESQGISNDIKD
LQEKYKSTSLEKNITLTFYEDYSASSIDIGTIMFIGMFLGLIFLVCTGSIIFFKQMSEAEEEVNRYQILKNIGVSDNVLK
TSIFKQVGFVFSVPLIMATIHSTVALSYIASLFHISLTILMLYTIVPYLVIYLIYYFITSMYYFNTVS

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 71137; Mature: 71006

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLYNLAKNNVTKNLKNYGMYLFSLIFTVSIFESFKTLEYSNAATKNILGNSNMLIVFNA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEC
SSIVISIFSLIFIYYSSNFFIKKRKKEIGLYALLGVENKRIATLLFFETLLLGIVALIVG
HHHHHHHHHHHHHHHCCCEEEEEHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
TLFGILFASISFSILSKISLGKFIFVFLFSPKAILITIITFLIFFIIISIQSSTIIYKYS
HHHHHHHHHHHHHHHHHHHHHHEEEEEHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
LIELFKANSKKEDKKKASIISAILSIAFILIGYGIYFFAVKANISFSFVTLILVIIGTYL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH
FFSSMLFFFVKIKRHNKNHLYNGMNIISTNQLLYRIKGNSRTLATITILTATTLTAVGTA
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEEEEEECCCEEEEEEEEHHHHHHHHHHHE
VALQMDFNKNITKTLPFGIVTTSTNENYINDIKNIINNYDKNKLLYEESIDTIMVNGSTR
EEEEECCCCCCCHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCC
ASHTNSYIVIKESELNKLLSHNSYSIDLPKLTNENDAFILNSFDSESKISTLSLDSKNGP
CCCCCCEEEEECHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCC
LKLNIIGNTYQSLVHHMLTTVTIVVKDSTYETLNLTEKTNYTILEIDNKKESQGISNDIK
EEEEEECCHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHH
DLQEKYKSTSLEKNITLTFYEDYSASSIDIGTIMFIGMFLGLIFLVCTGSIIFFKQMSEA
HHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EEEVNRYQILKNIGVSDNVLKTSIFKQVGFVFSVPLIMATIHSTVALSYIASLFHISLTI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLYTIVPYLVIYLIYYFITSMYYFNTVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLYNLAKNNVTKNLKNYGMYLFSLIFTVSIFESFKTLEYSNAATKNILGNSNMLIVFNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEC
SSIVISIFSLIFIYYSSNFFIKKRKKEIGLYALLGVENKRIATLLFFETLLLGIVALIVG
HHHHHHHHHHHHHHHCCCEEEEEHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
TLFGILFASISFSILSKISLGKFIFVFLFSPKAILITIITFLIFFIIISIQSSTIIYKYS
HHHHHHHHHHHHHHHHHHHHHHEEEEEHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
LIELFKANSKKEDKKKASIISAILSIAFILIGYGIYFFAVKANISFSFVTLILVIIGTYL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH
FFSSMLFFFVKIKRHNKNHLYNGMNIISTNQLLYRIKGNSRTLATITILTATTLTAVGTA
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEEEEEECCCEEEEEEEEHHHHHHHHHHHE
VALQMDFNKNITKTLPFGIVTTSTNENYINDIKNIINNYDKNKLLYEESIDTIMVNGSTR
EEEEECCCCCCCHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCC
ASHTNSYIVIKESELNKLLSHNSYSIDLPKLTNENDAFILNSFDSESKISTLSLDSKNGP
CCCCCCEEEEECHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCC
LKLNIIGNTYQSLVHHMLTTVTIVVKDSTYETLNLTEKTNYTILEIDNKKESQGISNDIK
EEEEEECCHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHH
DLQEKYKSTSLEKNITLTFYEDYSASSIDIGTIMFIGMFLGLIFLVCTGSIIFFKQMSEA
HHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EEEVNRYQILKNIGVSDNVLKTSIFKQVGFVFSVPLIMATIHSTVALSYIASLFHISLTI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLYTIVPYLVIYLIYYFITSMYYFNTVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]