| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187935232
Identifier: 187935232
GI number: 187935232
Start: 3526663
End: 3527106
Strand: Reverse
Name: 187935232
Synonym: CLL_A3347
Alternate gene names: NA
Gene position: 3527106-3526663 (Counterclockwise)
Preceding gene: 187934209
Following gene: 187932344
Centisome position: 92.81
GC content: 28.83
Gene sequence:
>444_bases ATGGATTTTTCAAAAATATCTGCAGGAATATTTGGAATAATTTTCATTGTGGTTTTATATTTTATAATTTATTATGCATT AAGAATAATGTATAAAGACATAAAAGGTGGAGGAAGAAGAAGAAGGCCTACGAGTTCTAGAGGAAGTTTTGGTTTAGAGA TATTAAAACCAGGAGAATCTAGTGATTTAAAAGAAGGGTCAGTAATTCCAATAAGAAATGATTTAACCATTGGAAGAAAA GAAGAAAATTCTATTTCTCTTTCAGATCAGCATGTTTCAGGTAGTCATGCAAGAGTATTTGTAAGAAATACTGGATTGTT TATCGAGGATTTAAATAGTACAAATGGAACTTATGTTAACGGAAACAAAATAAAAGGTAAACAAAAGTTATCTAACAAAG ATGAAATAAGAATAGGTACTTCTACATTTAAGGTTCTAAGCTAG
Upstream 100 bases:
>100_bases TTGCTGATAAAGGCAAAATGATACGTTTATAATGTCATAATTACTCTTTTTGTTGTATAATCATTATTATGATGTAGTAA ATATGTATTGAGGTGAAGTT
Downstream 100 bases:
>100_bases ATACTTAGCGGATGAGGTGAGATAGTGAGACGAAAAGGTGATACTCAGTTAATGATATTAACTTATATATTATGCATGGC TCTTTTTGTTAATTTAGCAA
Product: FHA-domain containing secreted protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; FHA Domain Protein; FHA-Domain Containing Secreted Protein; Fha Domain/Ggdef Domain Protein; Protein Containing Forkhead-Associated Domain; Signal Transduction Protein; FHA-Domain-Containing Protein
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MDFSKISAGIFGIIFIVVLYFIIYYALRIMYKDIKGGGRRRRPTSSRGSFGLEILKPGESSDLKEGSVIPIRNDLTIGRK EENSISLSDQHVSGSHARVFVRNTGLFIEDLNSTNGTYVNGNKIKGKQKLSNKDEIRIGTSTFKVLS
Sequences:
>Translated_147_residues MDFSKISAGIFGIIFIVVLYFIIYYALRIMYKDIKGGGRRRRPTSSRGSFGLEILKPGESSDLKEGSVIPIRNDLTIGRK EENSISLSDQHVSGSHARVFVRNTGLFIEDLNSTNGTYVNGNKIKGKQKLSNKDEIRIGTSTFKVLS >Mature_147_residues MDFSKISAGIFGIIFIVVLYFIIYYALRIMYKDIKGGGRRRRPTSSRGSFGLEILKPGESSDLKEGSVIPIRNDLTIGRK EENSISLSDQHVSGSHARVFVRNTGLFIEDLNSTNGTYVNGNKIKGKQKLSNKDEIRIGTSTFKVLS
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16363; Mature: 16363
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSKISAGIFGIIFIVVLYFIIYYALRIMYKDIKGGGRRRRPTSSRGSFGLEILKPGES CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCC SDLKEGSVIPIRNDLTIGRKEENSISLSDQHVSGSHARVFVRNTGLFIEDLNSTNGTYVN CCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCEEEEECCCCCCEEEE GNKIKGKQKLSNKDEIRIGTSTFKVLS CCCCCCHHHCCCCCCEEECCCEEEECC >Mature Secondary Structure MDFSKISAGIFGIIFIVVLYFIIYYALRIMYKDIKGGGRRRRPTSSRGSFGLEILKPGES CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCC SDLKEGSVIPIRNDLTIGRKEENSISLSDQHVSGSHARVFVRNTGLFIEDLNSTNGTYVN CCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCEEEEECCCCCCEEEE GNKIKGKQKLSNKDEIRIGTSTFKVLS CCCCCCHHHCCCCCCEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA