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The map label for this gene is ndhF [H]

Identifier: 187935032

GI number: 187935032

Start: 3497706

End: 3498524

Strand: Reverse

Name: ndhF [H]

Synonym: CLL_A3326

Alternate gene names: 187935032

Gene position: 3498524-3497706 (Counterclockwise)

Preceding gene: 187934488

Following gene: 187932520

Centisome position: 92.06

GC content: 29.43

Gene sequence:

>819_bases
ATGGTAAATGGTTTTATGCCTAAATCTTTAAAAGAAGCTTTAGATATTCGTTCAAATTATGATGTTGTTCCATATGGTGG
GGGAACAGATTTAATGATTGAAGGACAAAAAGATGTTAATTATTTGTTTTTAAATAAAGTTCCTGAAATGAAATGTATTG
TTGAAGATGAAGAGTATATCAGAATAGGAGGATCATGTACTTTTACTGAAGTGTTAGAATCGGAGATTATTCCAGAAATT
ATGAAACAAGCTGTTTCAAAAATTGCTGCTCCTGCTATAAGAAACTCTGGAACTATGGCAGGTAATATAGGAAATGGTTC
AGCAAAGGCAGATTCTGTATTGATTGAATATGTTACAGATGCAAAAATAGTATTAGCATCAGCTTCAAATACTAGAATAG
TTAAAATTGATGATTTCTATAAAGGAAGAAAAGAGCTAGATTTAGGAAAAGATGAATTGATTGTAGAAATTCTATTGCCT
AAAATTGGTCTAGAAAATTATTATTATAAAAAAATAGGTGCTAGAAATGCATTAGCTATCTCTCGTGTTTCATTTGCTGG
GATAATAAAAATTGATGATGAAAGAATAAAAGATATTGCAATTGCTTTTGGAGCAGTGTCAGGCACAGTACTAAGATTTA
AAGAATTAGAGAAAATGATGATAGGTAAAACATTACTGGAGGCAAGTGAGATAAAAGAAGATTTCATTGATGCATATAAA
CAAAAAATTATACCTACAAAGGGTAGAGTTTCAGCAGAATATAGAAAAAGGGTATGTATTAATTTAATAAAGGATTTCTT
AAATGAGAAAGGTATATAA

Upstream 100 bases:

>100_bases
AACAAATTAGAGAGGGGATTTCTGGGAATTTATGTCGTTGCACAGGATATAATGCTATTGTAAAGGCAATTAAAATTTCA
GCAGAGGAGGGAAAAGGATT

Downstream 100 bases:

>100_bases
GAGTTGAGTTAGAACAATAGAAAATTATAATATTAGCATTTATTAATTATAAGATAAGAAGGATGTTTGATATATAAATA
AATATGTAAAGTAATTAAGG

Product: medium FAD-binding subunit of molybdenum enzyme

Products: NA

Alternate protein names: NDH; Nicotinic acid hydroxylase FAD-subunit; NAH [H]

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MVNGFMPKSLKEALDIRSNYDVVPYGGGTDLMIEGQKDVNYLFLNKVPEMKCIVEDEEYIRIGGSCTFTEVLESEIIPEI
MKQAVSKIAAPAIRNSGTMAGNIGNGSAKADSVLIEYVTDAKIVLASASNTRIVKIDDFYKGRKELDLGKDELIVEILLP
KIGLENYYYKKIGARNALAISRVSFAGIIKIDDERIKDIAIAFGAVSGTVLRFKELEKMMIGKTLLEASEIKEDFIDAYK
QKIIPTKGRVSAEYRKRVCINLIKDFLNEKGI

Sequences:

>Translated_272_residues
MVNGFMPKSLKEALDIRSNYDVVPYGGGTDLMIEGQKDVNYLFLNKVPEMKCIVEDEEYIRIGGSCTFTEVLESEIIPEI
MKQAVSKIAAPAIRNSGTMAGNIGNGSAKADSVLIEYVTDAKIVLASASNTRIVKIDDFYKGRKELDLGKDELIVEILLP
KIGLENYYYKKIGARNALAISRVSFAGIIKIDDERIKDIAIAFGAVSGTVLRFKELEKMMIGKTLLEASEIKEDFIDAYK
QKIIPTKGRVSAEYRKRVCINLIKDFLNEKGI
>Mature_272_residues
MVNGFMPKSLKEALDIRSNYDVVPYGGGTDLMIEGQKDVNYLFLNKVPEMKCIVEDEEYIRIGGSCTFTEVLESEIIPEI
MKQAVSKIAAPAIRNSGTMAGNIGNGSAKADSVLIEYVTDAKIVLASASNTRIVKIDDFYKGRKELDLGKDELIVEILLP
KIGLENYYYKKIGARNALAISRVSFAGIIKIDDERIKDIAIAFGAVSGTVLRFKELEKMMIGKTLLEASEIKEDFIDAYK
QKIIPTKGRVSAEYRKRVCINLIKDFLNEKGI

Specific function: Catalyzes the hydroxylation of nicotinate to 6- hydroxynicotinate. Also active against 2-pyrazinecarboxylic acid, but inactive against other nicotinate analogs [H]

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789231, Length=260, Percent_Identity=29.6153846153846, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.5 [H]

Molecular weight: Translated: 30235; Mature: 30235

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNGFMPKSLKEALDIRSNYDVVPYGGGTDLMIEGQKDVNYLFLNKVPEMKCIVEDEEYI
CCCCCCCHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCEEEECCCCCEEEEECCCCEE
RIGGSCTFTEVLESEIIPEIMKQAVSKIAAPAIRNSGTMAGNIGNGSAKADSVLIEYVTD
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHEEEECC
AKIVLASASNTRIVKIDDFYKGRKELDLGKDELIVEILLPKIGLENYYYKKIGARNALAI
CEEEEEECCCCEEEEECHHHCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHEE
SRVSFAGIIKIDDERIKDIAIAFGAVSGTVLRFKELEKMMIGKTLLEASEIKEDFIDAYK
EEEEEEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKIIPTKGRVSAEYRKRVCINLIKDFLNEKGI
HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVNGFMPKSLKEALDIRSNYDVVPYGGGTDLMIEGQKDVNYLFLNKVPEMKCIVEDEEYI
CCCCCCCHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCEEEECCCCCEEEEECCCCEE
RIGGSCTFTEVLESEIIPEIMKQAVSKIAAPAIRNSGTMAGNIGNGSAKADSVLIEYVTD
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHEEEECC
AKIVLASASNTRIVKIDDFYKGRKELDLGKDELIVEILLPKIGLENYYYKKIGARNALAI
CEEEEEECCCCEEEEECHHHCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHEE
SRVSFAGIIKIDDERIKDIAIAFGAVSGTVLRFKELEKMMIGKTLLEASEIKEDFIDAYK
EEEEEEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKIIPTKGRVSAEYRKRVCINLIKDFLNEKGI
HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA