| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934804
Identifier: 187934804
GI number: 187934804
Start: 2836350
End: 2837765
Strand: Reverse
Name: 187934804
Synonym: CLL_A2728
Alternate gene names: NA
Gene position: 2837765-2836350 (Counterclockwise)
Preceding gene: 187934128
Following gene: 187932554
Centisome position: 74.67
GC content: 29.66
Gene sequence:
>1416_bases ATGGCAAAAGGTACATGGAATGAAAAAGATAAACCAAAGATTTCAGGATTCTATAATAGGATGCAGATAGTAGCAGAAGA GTCAGCAAATAATATTCAAGGAATTTTAGCTATGCCAGTAAAAAGTGATTGGGGTCCAGTAAATAAAGTAGTTTCTGTTT CTCAAGAAAGACATTTAAAAAATGCTTTTGGTAACAATGTAGATTTTACAGCATATAAGCTAGGAAAATTAGCATTGCTA GGAAAACCAAAAGAGTTGTTACTCTATAGACTTGTTGATAGTGCTGCTAAACCAGGGGAATTAATTCTTAAAAATACTGA AAGTTCTCCAACTAATGTAATTAAGTTACAAACAATATATCCAAGCTCAAGATCATTTAATGTAACCATAAGAACAAACA TAATTAATGATTCTGCTAAAGATATTATTTTATATGAAAATACTACTCAATTAGTTGAAGTTAGTGATCTAACTGGAAGT ATTGATGAAATAGTAGATAAAATAAACAAATCTGCTCTAAGCGATTATATTGTTGCTTCAAAAGTTGAAAATGCAACAGG AACATTAGCGGATATGGTAAATGATAAATTTACAGGTGGTAATGATGGTGCATCTAATATAACTAATACTGAATATTTAA AAGCAATGAAAGCATTTGAAAGTCATGGAATAGATGGGTTTACATTAGATGGTGTTACAGATGTAGGATTACACACAAGT GTTAAAACATGGATCAATGAATGCAAAAAAGAAGGACTTGATATATTAGCATTTTTAGCAAGTAATTCAGAAAGTTTAAG TCAGGCTAATTCAAAATCCAAAGAGTACAATGATTACTTAATGCACAATGTTTACTTAAAATCAACTACTTATGATGGAA TTACTTATACAGCAGGAGAAGTAGCTGTATATGTTGCTGCTTTAGCACTAGGAAAGAATTTAAAAGAATCTGTCTGTAAT GAAATTACGATATTTGATAGTGTAGAACCTCGTTTATCAAGAACTGAAATAGAAAGTGCATTAGAATCTGGAACTATAGT ATTTGATGTAATAGATAATGAAGTAGTTATTGTAGATGATGTAAATACTTATAAAAACTATAAGAATGAAAAAGAGGAAG CATTAGGCAATATTAGAGCAATTAGATTTATCAATACAGTAAACAAGCAAACAGCAGGTGCTGGAAAGGACTATATAGGT AAAATTTCAAATGATGAAACAGGACATACAGTAACATTGTGTGGATTAAAAACATTCTTTGAAACATATCAAAAGCTAGG TATTATAGCTAAATTTAATATAGAAACAGATGAAGAACTACAAAAGAACGCTCAATCAGATGAATTTTTCTGGAAGTGGG ATGCTGAATATATAAATGTCATAAAGAAGATTTTCAGTACAGGTAATTTAAAATAG
Upstream 100 bases:
>100_bases TATAGTTACAGGTGCTTTATTTAATTACAAAGAAACAGAATTATCTAAAACTAAATTTATAAAGATAGTTAAAGAATTTT TAGGAAAGAAGGTTGAGTAA
Downstream 100 bases:
>100_bases AATAGAGAGGATGTGTTTTAATGTCTACAAAAAAAGAACTTGATTCAAGTAGAATTTGTTCAGGTACTTATGGAAGAGTT TTTAAAGATGGAAAGGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MAKGTWNEKDKPKISGFYNRMQIVAEESANNIQGILAMPVKSDWGPVNKVVSVSQERHLKNAFGNNVDFTAYKLGKLALL GKPKELLLYRLVDSAAKPGELILKNTESSPTNVIKLQTIYPSSRSFNVTIRTNIINDSAKDIILYENTTQLVEVSDLTGS IDEIVDKINKSALSDYIVASKVENATGTLADMVNDKFTGGNDGASNITNTEYLKAMKAFESHGIDGFTLDGVTDVGLHTS VKTWINECKKEGLDILAFLASNSESLSQANSKSKEYNDYLMHNVYLKSTTYDGITYTAGEVAVYVAALALGKNLKESVCN EITIFDSVEPRLSRTEIESALESGTIVFDVIDNEVVIVDDVNTYKNYKNEKEEALGNIRAIRFINTVNKQTAGAGKDYIG KISNDETGHTVTLCGLKTFFETYQKLGIIAKFNIETDEELQKNAQSDEFFWKWDAEYINVIKKIFSTGNLK
Sequences:
>Translated_471_residues MAKGTWNEKDKPKISGFYNRMQIVAEESANNIQGILAMPVKSDWGPVNKVVSVSQERHLKNAFGNNVDFTAYKLGKLALL GKPKELLLYRLVDSAAKPGELILKNTESSPTNVIKLQTIYPSSRSFNVTIRTNIINDSAKDIILYENTTQLVEVSDLTGS IDEIVDKINKSALSDYIVASKVENATGTLADMVNDKFTGGNDGASNITNTEYLKAMKAFESHGIDGFTLDGVTDVGLHTS VKTWINECKKEGLDILAFLASNSESLSQANSKSKEYNDYLMHNVYLKSTTYDGITYTAGEVAVYVAALALGKNLKESVCN EITIFDSVEPRLSRTEIESALESGTIVFDVIDNEVVIVDDVNTYKNYKNEKEEALGNIRAIRFINTVNKQTAGAGKDYIG KISNDETGHTVTLCGLKTFFETYQKLGIIAKFNIETDEELQKNAQSDEFFWKWDAEYINVIKKIFSTGNLK >Mature_470_residues AKGTWNEKDKPKISGFYNRMQIVAEESANNIQGILAMPVKSDWGPVNKVVSVSQERHLKNAFGNNVDFTAYKLGKLALLG KPKELLLYRLVDSAAKPGELILKNTESSPTNVIKLQTIYPSSRSFNVTIRTNIINDSAKDIILYENTTQLVEVSDLTGSI DEIVDKINKSALSDYIVASKVENATGTLADMVNDKFTGGNDGASNITNTEYLKAMKAFESHGIDGFTLDGVTDVGLHTSV KTWINECKKEGLDILAFLASNSESLSQANSKSKEYNDYLMHNVYLKSTTYDGITYTAGEVAVYVAALALGKNLKESVCNE ITIFDSVEPRLSRTEIESALESGTIVFDVIDNEVVIVDDVNTYKNYKNEKEEALGNIRAIRFINTVNKQTAGAGKDYIGK ISNDETGHTVTLCGLKTFFETYQKLGIIAKFNIETDEELQKNAQSDEFFWKWDAEYINVIKKIFSTGNLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52168; Mature: 52037
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGTWNEKDKPKISGFYNRMQIVAEESANNIQGILAMPVKSDWGPVNKVVSVSQERHLK CCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH NAFGNNVDFTAYKLGKLALLGKPKELLLYRLVDSAAKPGELILKNTESSPTNVIKLQTIY HHCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEEEC PSSRSFNVTIRTNIINDSAKDIILYENTTQLVEVSDLTGSIDEIVDKINKSALSDYIVAS CCCCEEEEEEEEEEECCCCCEEEEEECCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHH KVENATGTLADMVNDKFTGGNDGASNITNTEYLKAMKAFESHGIDGFTLDGVTDVGLHTS HCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCEECCCCHHH VKTWINECKKEGLDILAFLASNSESLSQANSKSKEYNDYLMHNVYLKSTTYDGITYTAGE HHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHEEEEEEEECCCCEEEEHHH VAVYVAALALGKNLKESVCNEITIFDSVEPRLSRTEIESALESGTIVFDVIDNEVVIVDD HHHHHHHHHHCCHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCEEEEEC VNTYKNYKNEKEEALGNIRAIRFINTVNKQTAGAGKDYIGKISNDETGHTVTLCGLKTFF CHHHHHCCCHHHHHHHHHHHEEEHHHHCHHCCCCCCHHHCCCCCCCCCCEEEEHHHHHHH ETYQKLGIIAKFNIETDEELQKNAQSDEFFWKWDAEYINVIKKIFSTGNLK HHHHHCCEEEEECCCCHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCC >Mature Secondary Structure AKGTWNEKDKPKISGFYNRMQIVAEESANNIQGILAMPVKSDWGPVNKVVSVSQERHLK CCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH NAFGNNVDFTAYKLGKLALLGKPKELLLYRLVDSAAKPGELILKNTESSPTNVIKLQTIY HHCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEEEEC PSSRSFNVTIRTNIINDSAKDIILYENTTQLVEVSDLTGSIDEIVDKINKSALSDYIVAS CCCCEEEEEEEEEEECCCCCEEEEEECCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHH KVENATGTLADMVNDKFTGGNDGASNITNTEYLKAMKAFESHGIDGFTLDGVTDVGLHTS HCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCEECCCCHHH VKTWINECKKEGLDILAFLASNSESLSQANSKSKEYNDYLMHNVYLKSTTYDGITYTAGE HHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHEEEEEEEECCCCEEEEHHH VAVYVAALALGKNLKESVCNEITIFDSVEPRLSRTEIESALESGTIVFDVIDNEVVIVDD HHHHHHHHHHCCHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCEEEEEC VNTYKNYKNEKEEALGNIRAIRFINTVNKQTAGAGKDYIGKISNDETGHTVTLCGLKTFF CHHHHHCCCHHHHHHHHHHHEEEHHHHCHHCCCCCCHHHCCCCCCCCCCEEEEHHHHHHH ETYQKLGIIAKFNIETDEELQKNAQSDEFFWKWDAEYINVIKKIFSTGNLK HHHHHCCEEEEECCCCHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA