| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is catQ [H]
Identifier: 187934752
GI number: 187934752
Start: 2228209
End: 2228853
Strand: Reverse
Name: catQ [H]
Synonym: CLL_A2128
Alternate gene names: 187934752
Gene position: 2228853-2228209 (Counterclockwise)
Preceding gene: 187935741
Following gene: 187932440
Centisome position: 58.65
GC content: 28.37
Gene sequence:
>645_bases ATGAACTTTAAGTTAATTGATATAGAAAACTGGGAACGAAAAGAGTGCTTTAATCATTTCATGAATATTGCTAAAAGTAC TTATAGTTTGACTGTTAATGTAGACATTTCAAAACTTTTAAGTTTAACTAAAGAAAAGGGATATAGGTTTTATCCAACAT TTACATGGATTGTTTCAAGAGCAATAAATAAACATAAAGAATTTAAAATGGGTTTTGATCAAAATGGAAATCTGGGGTAC TTTGAAGAAATTTCACCAGATTATTCTGTTCTTAATGAAAAAACAAAAATTATGAATAGTCTTTGTACGTCATATAATGA TAATTTCAAATGGTTTTATGAGGAAATGGTAAGTGATATGAATAATTATAAAGTTAGGGGAATTTTGACAGAACCACAGG ATAATTTCTTTTTAATCTCATGTCTACCATGGTTAAGCTATACTTCTTTTGATGTTACAAATCAAAGTGAAAGGCAATTT TTATTTCCTATGGTTACATGGGGAAAATACTTTGAACATGATGGTAAAGTACTTATGCCTTTAACTTTACAAGTACACCA TGCTGTTGCTGATGGATATCACTGTTCACTATTTTATTCTGATGTGCAACAAGTACTTGAAAATCCACAGAATTATATTG AATAA
Upstream 100 bases:
>100_bases TATTGTAATTATGTCTCATTGATAGATATAAATTAATAACAAGATTAAAATATACTATAATTAGTTTGTAATACTAGTAT ATATGATAAGGAGAAAATAT
Downstream 100 bases:
>100_bases AATGATTCATTAATAGAATAGAAATTTAGTATTAGTACGTATAATTTATTAATAAGACAAGCATCCTCCAATATGAATAA GCTGTTGCAATATGCAACAG
Product: chloramphenicol O-acetyltransferase
Products: NA
Alternate protein names: CAT [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNFKLIDIENWERKECFNHFMNIAKSTYSLTVNVDISKLLSLTKEKGYRFYPTFTWIVSRAINKHKEFKMGFDQNGNLGY FEEISPDYSVLNEKTKIMNSLCTSYNDNFKWFYEEMVSDMNNYKVRGILTEPQDNFFLISCLPWLSYTSFDVTNQSERQF LFPMVTWGKYFEHDGKVLMPLTLQVHHAVADGYHCSLFYSDVQQVLENPQNYIE
Sequences:
>Translated_214_residues MNFKLIDIENWERKECFNHFMNIAKSTYSLTVNVDISKLLSLTKEKGYRFYPTFTWIVSRAINKHKEFKMGFDQNGNLGY FEEISPDYSVLNEKTKIMNSLCTSYNDNFKWFYEEMVSDMNNYKVRGILTEPQDNFFLISCLPWLSYTSFDVTNQSERQF LFPMVTWGKYFEHDGKVLMPLTLQVHHAVADGYHCSLFYSDVQQVLENPQNYIE >Mature_214_residues MNFKLIDIENWERKECFNHFMNIAKSTYSLTVNVDISKLLSLTKEKGYRFYPTFTWIVSRAINKHKEFKMGFDQNGNLGY FEEISPDYSVLNEKTKIMNSLCTSYNDNFKWFYEEMVSDMNNYKVRGILTEPQDNFFLISCLPWLSYTSFDVTNQSERQF LFPMVTWGKYFEHDGKVLMPLTLQVHHAVADGYHCSLFYSDVQQVLENPQNYIE
Specific function: This enzyme is an effector of chloramphenicol resistance in bacteria [H]
COG id: COG4845
COG function: function code V; Chloramphenicol O-acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloramphenicol acetyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023213 - InterPro: IPR018372 - InterPro: IPR001707 - ProDom: PD002660 [H]
Pfam domain/function: PF00302 CAT [H]
EC number: =2.3.1.28 [H]
Molecular weight: Translated: 25440; Mature: 25440
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00100 CAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKLIDIENWERKECFNHFMNIAKSTYSLTVNVDISKLLSLTKEKGYRFYPTFTWIVSR CCEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEECHHHHHHHHHHCCCEECHHHHHHHHH AINKHKEFKMGFDQNGNLGYFEEISPDYSVLNEKTKIMNSLCTSYNDNFKWFYEEMVSDM HHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC NNYKVRGILTEPQDNFFLISCLPWLSYTSFDVTNQSERQFLFPMVTWGKYFEHDGKVLMP CCEEEEEEEECCCCCEEEEEEECHHCCCEECCCCCCCCEEEHHHHHHHHHHHCCCCEEEE LTLQVHHAVADGYHCSLFYSDVQQVLENPQNYIE EEEEEHHHHHCCEEEEHHHHHHHHHHHCHHHHCC >Mature Secondary Structure MNFKLIDIENWERKECFNHFMNIAKSTYSLTVNVDISKLLSLTKEKGYRFYPTFTWIVSR CCEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEECHHHHHHHHHHCCCEECHHHHHHHHH AINKHKEFKMGFDQNGNLGYFEEISPDYSVLNEKTKIMNSLCTSYNDNFKWFYEEMVSDM HHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC NNYKVRGILTEPQDNFFLISCLPWLSYTSFDVTNQSERQFLFPMVTWGKYFEHDGKVLMP CCEEEEEEEECCCCCEEEEEEECHHCCCEECCCCCCCCEEEHHHHHHHHHHHCCCCEEEE LTLQVHHAVADGYHCSLFYSDVQQVLENPQNYIE EEEEEHHHHHCCEEEEHHHHHHHHHHHCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2039197 [H]