| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934655
Identifier: 187934655
GI number: 187934655
Start: 1896818
End: 1897249
Strand: Reverse
Name: 187934655
Synonym: CLL_A1813
Alternate gene names: NA
Gene position: 1897249-1896818 (Counterclockwise)
Preceding gene: 187933104
Following gene: 187933857
Centisome position: 49.92
GC content: 25.23
Gene sequence:
>432_bases ATGAAAAATAAATATACTGATGATGATTATTGCGATATATATGAAAATAAAATCTGTGATAATTGTGGTAAATGCTTAGA AATAGATGGAGTGGATATTAAAGCTATAAAAATAGAAGAAATTGCAAAAAATAAAGAGGAAAATAAAATGTTGGAGGAAG AATTCCTAAACAACTTAAAATCATCTCTTAACGAAGAACAAATAGAAGAATTAGAGGAAAATAATTTAAACTTAAAAGAT GCGTATTCTAAGTTTATTGAATCTAAGGGATTGAATTCTTCTGAATTTTCTATTTCAAAAGAAGAAGAATATGAAGATGC ATTTGATCATATTGAATATTTAGATGACAACGAATTGTTTGATGATGAAAATATAGAAGATCTTACTGAAGAAGTATATC CAGGTGTAAGAAAATTCAAAAACAAAGCATAA
Upstream 100 bases:
>100_bases GTTCTGTATGTTTGGAAGATTAAATTTAATATTTGATTTAAATTTACGGTTTTGATATAATGTAATGACGATTTCATAAT AGAAATGAGGGTGCTTGATA
Downstream 100 bases:
>100_bases AAATGTATATATATCCTTTTTTAACACAAACTATTATTGAAATAGTTGTGGAAAAGAGGTGTAACTTTTATGAAAAAGAA ATCAATTTTAGCATTAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKNKYTDDDYCDIYENKICDNCGKCLEIDGVDIKAIKIEEIAKNKEENKMLEEEFLNNLKSSLNEEQIEELEENNLNLKD AYSKFIESKGLNSSEFSISKEEEYEDAFDHIEYLDDNELFDDENIEDLTEEVYPGVRKFKNKA
Sequences:
>Translated_143_residues MKNKYTDDDYCDIYENKICDNCGKCLEIDGVDIKAIKIEEIAKNKEENKMLEEEFLNNLKSSLNEEQIEELEENNLNLKD AYSKFIESKGLNSSEFSISKEEEYEDAFDHIEYLDDNELFDDENIEDLTEEVYPGVRKFKNKA >Mature_143_residues MKNKYTDDDYCDIYENKICDNCGKCLEIDGVDIKAIKIEEIAKNKEENKMLEEEFLNNLKSSLNEEQIEELEENNLNLKD AYSKFIESKGLNSSEFSISKEEEYEDAFDHIEYLDDNELFDDENIEDLTEEVYPGVRKFKNKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16836; Mature: 16836
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKYTDDDYCDIYENKICDNCGKCLEIDGVDIKAIKIEEIAKNKEENKMLEEEFLNNLK CCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHH SSLNEEQIEELEENNLNLKDAYSKFIESKGLNSSEFSISKEEEYEDAFDHIEYLDDNELF HHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC DDENIEDLTEEVYPGVRKFKNKA CCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKNKYTDDDYCDIYENKICDNCGKCLEIDGVDIKAIKIEEIAKNKEENKMLEEEFLNNLK CCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHH SSLNEEQIEELEENNLNLKDAYSKFIESKGLNSSEFSISKEEEYEDAFDHIEYLDDNELF HHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC DDENIEDLTEEVYPGVRKFKNKA CCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA