| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934618
Identifier: 187934618
GI number: 187934618
Start: 2241384
End: 2241863
Strand: Reverse
Name: 187934618
Synonym: CLL_A2149
Alternate gene names: NA
Gene position: 2241863-2241384 (Counterclockwise)
Preceding gene: 187935488
Following gene: 187933840
Centisome position: 58.99
GC content: 21.88
Gene sequence:
>480_bases ATGGATGAATTTAAAAATTGTATAATAGAATACTTAATTCCTAGATTAATGCGTAACAAAGAATTGATTATTAATTTAAA ATATGAAGACAATGCTTTAGATAGCATAGTACTTGATGGGCAAAAAGAAGATTTTTTCTTAAGTATTTCAGAAAAAGAGA TTGATATTTATTGGTTTAATGAACATTTTATTTTTTCAAAGTATCGAAGTACATTGACAAGTGAAGACACATTTGGAGAA ATAATATATGAAAGAGAACTATATAAAATATCAAATCAAAAATATATGGATTTAATACTGTCATTTATGAATGTGTTAGT GGGATCTTTATTTATAAAAAAGGAGGAAATAAATAGATCAGAGCAACTAATGTGGGATAACAAAAAAAGTTATATTATAT ATCTAAATAATAAAAATATAACAAAAAACGAAACAACTATTGGAAATGTTAAATTTATAATAAATAAAAGTAAAAGATAA
Upstream 100 bases:
>100_bases GATATATAGAATTATCATTGGAAGAAATTATTAATATACAGGAAAGTTAAAGCGATTAGCAGTACAAATAGAATCTGCAT TATTAATGAGGTTACATGAA
Downstream 100 bases:
>100_bases GTTATAAATTCCAATTTGAATAATCGAAATGGAATTTTATTAAATTGTTATTATTAGGCTGATTAAGAATTCCATTATAT GAATGAGGGAGTAAAATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MDEFKNCIIEYLIPRLMRNKELIINLKYEDNALDSIVLDGQKEDFFLSISEKEIDIYWFNEHFIFSKYRSTLTSEDTFGE IIYERELYKISNQKYMDLILSFMNVLVGSLFIKKEEINRSEQLMWDNKKSYIIYLNNKNITKNETTIGNVKFIINKSKR
Sequences:
>Translated_159_residues MDEFKNCIIEYLIPRLMRNKELIINLKYEDNALDSIVLDGQKEDFFLSISEKEIDIYWFNEHFIFSKYRSTLTSEDTFGE IIYERELYKISNQKYMDLILSFMNVLVGSLFIKKEEINRSEQLMWDNKKSYIIYLNNKNITKNETTIGNVKFIINKSKR >Mature_159_residues MDEFKNCIIEYLIPRLMRNKELIINLKYEDNALDSIVLDGQKEDFFLSISEKEIDIYWFNEHFIFSKYRSTLTSEDTFGE IIYERELYKISNQKYMDLILSFMNVLVGSLFIKKEEINRSEQLMWDNKKSYIIYLNNKNITKNETTIGNVKFIINKSKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19172; Mature: 19172
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEFKNCIIEYLIPRLMRNKELIINLKYEDNALDSIVLDGQKEDFFLSISEKEIDIYWFN CCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCEEEEEEEC EHFIFSKYRSTLTSEDTFGEIIYERELYKISNQKYMDLILSFMNVLVGSLFIKKEEINRS CEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC EQLMWDNKKSYIIYLNNKNITKNETTIGNVKFIINKSKR HHEEECCCCCEEEEECCCCCCCCCCEECEEEEEEECCCC >Mature Secondary Structure MDEFKNCIIEYLIPRLMRNKELIINLKYEDNALDSIVLDGQKEDFFLSISEKEIDIYWFN CCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCEEEEEEEC EHFIFSKYRSTLTSEDTFGEIIYERELYKISNQKYMDLILSFMNVLVGSLFIKKEEINRS CEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC EQLMWDNKKSYIIYLNNKNITKNETTIGNVKFIINKSKR HHEEECCCCCEEEEECCCCCCCCCCEECEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA