| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934345
Identifier: 187934345
GI number: 187934345
Start: 1406002
End: 1407294
Strand: Reverse
Name: 187934345
Synonym: CLL_A1369
Alternate gene names: NA
Gene position: 1407294-1406002 (Counterclockwise)
Preceding gene: 187932417
Following gene: 187935157
Centisome position: 37.03
GC content: 32.71
Gene sequence:
>1293_bases ATGGAAAATATGATTGATTTAATCGTAGTTGGTGCAGGACCTGCAGGACTAATGACTGCAAAAAGAGCAGCAGAATTAGG TTTAAAAGTAACAGTCATTGAAATTAAGAAAGATATTACAAAAGTAAAACGTGCATGCTCTGCTCAATTTGTTACCGATG AAGGATATGAAAATGAAACTATTAAAATAGAAGATAATAAAATAATCTTTACAAAGAATGGGTTTCATATAAATTATACT GGACGTTTATTAAATATTGTTGACAACTATCATCACTCTCCTAGTGGTCATAAAATACATTTAGCACATCCAGATCGTAG ACCATTTGCTGTAAAGTTCGATAAAGGACATCTACTTTCAGATTTATGTAAAGATTGTGAAGAACTAGGTGTAGAATTAA TGTTAGAAACTATTGCATATGGGGGAGAAGACTTAGGTGACCATGTTAGAGTAGACATTAAAAATCATAAAAAAAACTCT TCTATTTTAGCAAAGAAATTAGTTATTGCTGAAGGTGCCAATGCAAAATTAACTGGATTATTTGGTCTTAACAAAGGAAG AACTTACTATGGCACACCTTTTGTATTTAGTTGTATTATGGAAGGTACTACTGGGTTTGAACCACAAAGTTGGAATCAAT TCTATGGAAGTGAATATCATCCTTTTGCAGAAGTAATGGTGGAATCTGCTATAGAAGATAATGATGCAATTGAACTTACC ATTATGGGTAATAAAGATTTAAGACCTGATATTCTTTTCGAAAAACTTATTAAAGATAGCCCAATGAGTCACCACTTTAC TAATGCCCGTGTCATAGAAAGAAGAGGATGTTCACTTAAGTCGTTTGATTCACTTCTAAAACCATACAGCGGTAATGTAC TTGTAATTGGTGATAGTGCAGCTCATATTGAAGTTATTGTTCAAGGAGCATTAATGTGTGGATACCATGCAGCTAATGCT ATAAATGATGAACTTATGGGCATAAATGGTTTTGAGAAATATACAAGCTGGTGGGATAAAGCATTTGATTTCAATCGTAC TAACCCTGTTGAATTCGTTAAGCTATATGGTAGTTTAGGTATGAGACCAAAATACTCAGATGAAGAACTTGACTATATGT TTTCTTTGGTTGAAGGCGAATTAGTTAATGGAAATTTCAGTCAGTTTGAGGTTCCTAAAAACGTATGGAAGGCAATTTTA GCGCATAAGGCTCAGATTGAAAATGAAAACCCAATTTTATTTGATAAAATAAAGAATATCCATGAGTTGAATCGTGAAGG AAAACTTAATTAA
Upstream 100 bases:
>100_bases AATTCAAAGTGAAAGACCTATTATATATGAAAAAATCAAAAAAATGAATACTATGACTTTAACAGATACATTTAATAATT AATTTGAGAGGAGCTATAAT
Downstream 100 bases:
>100_bases AACCATGTTATAGATAACTATTATTTTTAAGAATGGGGAAATGATATGAGTAAAACAGATAATGAAAATATTTTTGATAT TAATAAGAAAATTATTGAGC
Product: pyridine nucleotide-disulphide oxidoreductase domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MENMIDLIVVGAGPAGLMTAKRAAELGLKVTVIEIKKDITKVKRACSAQFVTDEGYENETIKIEDNKIIFTKNGFHINYT GRLLNIVDNYHHSPSGHKIHLAHPDRRPFAVKFDKGHLLSDLCKDCEELGVELMLETIAYGGEDLGDHVRVDIKNHKKNS SILAKKLVIAEGANAKLTGLFGLNKGRTYYGTPFVFSCIMEGTTGFEPQSWNQFYGSEYHPFAEVMVESAIEDNDAIELT IMGNKDLRPDILFEKLIKDSPMSHHFTNARVIERRGCSLKSFDSLLKPYSGNVLVIGDSAAHIEVIVQGALMCGYHAANA INDELMGINGFEKYTSWWDKAFDFNRTNPVEFVKLYGSLGMRPKYSDEELDYMFSLVEGELVNGNFSQFEVPKNVWKAIL AHKAQIENENPILFDKIKNIHELNREGKLN
Sequences:
>Translated_430_residues MENMIDLIVVGAGPAGLMTAKRAAELGLKVTVIEIKKDITKVKRACSAQFVTDEGYENETIKIEDNKIIFTKNGFHINYT GRLLNIVDNYHHSPSGHKIHLAHPDRRPFAVKFDKGHLLSDLCKDCEELGVELMLETIAYGGEDLGDHVRVDIKNHKKNS SILAKKLVIAEGANAKLTGLFGLNKGRTYYGTPFVFSCIMEGTTGFEPQSWNQFYGSEYHPFAEVMVESAIEDNDAIELT IMGNKDLRPDILFEKLIKDSPMSHHFTNARVIERRGCSLKSFDSLLKPYSGNVLVIGDSAAHIEVIVQGALMCGYHAANA INDELMGINGFEKYTSWWDKAFDFNRTNPVEFVKLYGSLGMRPKYSDEELDYMFSLVEGELVNGNFSQFEVPKNVWKAIL AHKAQIENENPILFDKIKNIHELNREGKLN >Mature_430_residues MENMIDLIVVGAGPAGLMTAKRAAELGLKVTVIEIKKDITKVKRACSAQFVTDEGYENETIKIEDNKIIFTKNGFHINYT GRLLNIVDNYHHSPSGHKIHLAHPDRRPFAVKFDKGHLLSDLCKDCEELGVELMLETIAYGGEDLGDHVRVDIKNHKKNS SILAKKLVIAEGANAKLTGLFGLNKGRTYYGTPFVFSCIMEGTTGFEPQSWNQFYGSEYHPFAEVMVESAIEDNDAIELT IMGNKDLRPDILFEKLIKDSPMSHHFTNARVIERRGCSLKSFDSLLKPYSGNVLVIGDSAAHIEVIVQGALMCGYHAANA INDELMGINGFEKYTSWWDKAFDFNRTNPVEFVKLYGSLGMRPKYSDEELDYMFSLVEGELVNGNFSQFEVPKNVWKAIL AHKAQIENENPILFDKIKNIHELNREGKLN
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48356; Mature: 48356
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENMIDLIVVGAGPAGLMTAKRAAELGLKVTVIEIKKDITKVKRACSAQFVTDEGYENET CCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCEEEECCCCCCCE IKIEDNKIIFTKNGFHINYTGRLLNIVDNYHHSPSGHKIHLAHPDRRPFAVKFDKGHLLS EEEECCEEEEEECCEEEEECHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCHHH DLCKDCEELGVELMLETIAYGGEDLGDHVRVDIKNHKKNSSILAKKLVIAEGANAKLTGL HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHEEECCCCCEEEEE FGLNKGRTYYGTPFVFSCIMEGTTGFEPQSWNQFYGSEYHPFAEVMVESAIEDNDAIELT EECCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCEEEE IMGNKDLRPDILFEKLIKDSPMSHHFTNARVIERRGCSLKSFDSLLKPYSGNVLVIGDSA EECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEHHCCCCHHHHHHHHCCCCCCEEEEECCC AHIEVIVQGALMCGYHAANAINDELMGINGFEKYTSWWDKAFDFNRTNPVEFVKLYGSLG CEEHHEEHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC MRPKYSDEELDYMFSLVEGELVNGNFSQFEVPKNVWKAILAHKAQIENENPILFDKIKNI CCCCCCCHHHHHHHHHHCCEEECCCCCCEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHH HELNREGKLN HHHCCCCCCC >Mature Secondary Structure MENMIDLIVVGAGPAGLMTAKRAAELGLKVTVIEIKKDITKVKRACSAQFVTDEGYENET CCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCEEEECCCCCCCE IKIEDNKIIFTKNGFHINYTGRLLNIVDNYHHSPSGHKIHLAHPDRRPFAVKFDKGHLLS EEEECCEEEEEECCEEEEECHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCHHH DLCKDCEELGVELMLETIAYGGEDLGDHVRVDIKNHKKNSSILAKKLVIAEGANAKLTGL HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHEEECCCCCEEEEE FGLNKGRTYYGTPFVFSCIMEGTTGFEPQSWNQFYGSEYHPFAEVMVESAIEDNDAIELT EECCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCEEEE IMGNKDLRPDILFEKLIKDSPMSHHFTNARVIERRGCSLKSFDSLLKPYSGNVLVIGDSA EECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEHHCCCCHHHHHHHHCCCCCCEEEEECCC AHIEVIVQGALMCGYHAANAINDELMGINGFEKYTSWWDKAFDFNRTNPVEFVKLYGSLG CEEHHEEHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC MRPKYSDEELDYMFSLVEGELVNGNFSQFEVPKNVWKAILAHKAQIENENPILFDKIKNI CCCCCCCHHHHHHHHHHCCEEECCCCCCEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHH HELNREGKLN HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA