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The map label for this gene is pqqL [C]

Identifier: 187933933

GI number: 187933933

Start: 2636961

End: 2638202

Strand: Reverse

Name: pqqL [C]

Synonym: CLL_A2530

Alternate gene names: 187933933

Gene position: 2638202-2636961 (Counterclockwise)

Preceding gene: 187934066

Following gene: 187934517

Centisome position: 69.42

GC content: 24.96

Gene sequence:

>1242_bases
ATGATAAAATTAAATTTCGATATAAAAAGGCATAAGTTAAATAATGGATTAGAAGTAATAACTATAAATAAGAATACACA
AATACCATCTATAAACATAGGAATTAAAGTTGGTGCACTAAATGAAAATTTAGAACAAAAGGGAATAAGTCATTTTATTG
AACATTGTTTATTTAAGGGGACATATACTAGAAATGATGAAGAGCTTAATAGTGATTTAGAAGCTTTAGGGGGAGAGTAT
AATGCATATACTGATTATGAAGCTACAGTGTATACAATTAGTTGTTTGATGGAAGAATTTAAGAATGGAGTATCTATACT
AAGCGATATGATTATAAATTCTAAATTTGAAGAAAGCGAAATAGAAAAAGAAAGAGGCGTAATTTTAGCTGAAATAAGGA
CAGGAAAAGATGATTTAGAAGATTATAGTTTTAAAAATGTAAATGATATAGCATTTACTAAGAGCGCTTTTAAATATGAA
GTAGCAGGTCTTGAAGAGAATGTTAATAAATTTACTAGAGAAGAAATAAAAAGATTCTATAAAAAATATTATACACCTAA
AAATTCATTAATTACTATGGTTTCACCATTGAGTCATGATGAAGCGATAAAATTAATAGAAGATAATTTTAGTATGTGGA
CTGGAGAAAAGCCAGAACATATAGATGTTATTAAAGAAAAGAATAAGAATATAACAAAAATTACGTACAAAAAAGATATA
GAACAAAGTACAATAATCTATTTGTATACTTTTAATGAGCTAGAAAAAGAAGATGAATTACCACTTAGAATATTAAATCA
TAAATTAGGTGAGAGTGCTAATTCACTTTTATTTAGAGAAGTAAGAGAAAATAGAGGGCTTGCTTATGATATATATACAA
ACTTAGAAATAAGTACTAATATAAAAACTATATATATATATACATCAGTAGCTGAAGAAAATTTAGAAGAAGCTAAATGT
GCAATAGAGCAAACATTAAATAATGTTATTGAGGGAAAAATTCAAATTTGTGATAGGGATTTAGATGTTATGAAAAAAGT
TCATAAGACAGCAGTAATTTCAACACTAGAGGATTCATTGGAACTTTGTAATTATATATTGCATCAAGAGCTTGAAGGTG
AAGATATATTTGAATTTGTTAAAGATATGGAAAGATTAAATAATATTGATAAAGTTAAAATAAATGAAGTTAGTAAAAAA
GTTTTTAAAAATCCAACTATTCATATATTAAAATCTAATTAA

Upstream 100 bases:

>100_bases
AAGAGTATCTATATATTAATGAAGTTGAAATAATGTGTTATAATTTTATTTTAGATACATTATATATTTAAGTAGTTAGA
ATTTATTAGGAGAAGTGTGA

Downstream 100 bases:

>100_bases
TCCTGAACTACGTTTGGAAAGGGTGCATGACTAAAAAAATATGCTCCACAAACGCTTAACGATTTTTTATTAAGCTTTAT
TTTAAATATGTGTTGATATA

Product: peptidase, M16 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MIKLNFDIKRHKLNNGLEVITINKNTQIPSINIGIKVGALNENLEQKGISHFIEHCLFKGTYTRNDEELNSDLEALGGEY
NAYTDYEATVYTISCLMEEFKNGVSILSDMIINSKFEESEIEKERGVILAEIRTGKDDLEDYSFKNVNDIAFTKSAFKYE
VAGLEENVNKFTREEIKRFYKKYYTPKNSLITMVSPLSHDEAIKLIEDNFSMWTGEKPEHIDVIKEKNKNITKITYKKDI
EQSTIIYLYTFNELEKEDELPLRILNHKLGESANSLLFREVRENRGLAYDIYTNLEISTNIKTIYIYTSVAEENLEEAKC
AIEQTLNNVIEGKIQICDRDLDVMKKVHKTAVISTLEDSLELCNYILHQELEGEDIFEFVKDMERLNNIDKVKINEVSKK
VFKNPTIHILKSN

Sequences:

>Translated_413_residues
MIKLNFDIKRHKLNNGLEVITINKNTQIPSINIGIKVGALNENLEQKGISHFIEHCLFKGTYTRNDEELNSDLEALGGEY
NAYTDYEATVYTISCLMEEFKNGVSILSDMIINSKFEESEIEKERGVILAEIRTGKDDLEDYSFKNVNDIAFTKSAFKYE
VAGLEENVNKFTREEIKRFYKKYYTPKNSLITMVSPLSHDEAIKLIEDNFSMWTGEKPEHIDVIKEKNKNITKITYKKDI
EQSTIIYLYTFNELEKEDELPLRILNHKLGESANSLLFREVRENRGLAYDIYTNLEISTNIKTIYIYTSVAEENLEEAKC
AIEQTLNNVIEGKIQICDRDLDVMKKVHKTAVISTLEDSLELCNYILHQELEGEDIFEFVKDMERLNNIDKVKINEVSKK
VFKNPTIHILKSN
>Mature_413_residues
MIKLNFDIKRHKLNNGLEVITINKNTQIPSINIGIKVGALNENLEQKGISHFIEHCLFKGTYTRNDEELNSDLEALGGEY
NAYTDYEATVYTISCLMEEFKNGVSILSDMIINSKFEESEIEKERGVILAEIRTGKDDLEDYSFKNVNDIAFTKSAFKYE
VAGLEENVNKFTREEIKRFYKKYYTPKNSLITMVSPLSHDEAIKLIEDNFSMWTGEKPEHIDVIKEKNKNITKITYKKDI
EQSTIIYLYTFNELEKEDELPLRILNHKLGESANSLLFREVRENRGLAYDIYTNLEISTNIKTIYIYTSVAEENLEEAKC
AIEQTLNNVIEGKIQICDRDLDVMKKVHKTAVISTLEDSLELCNYILHQELEGEDIFEFVKDMERLNNIDKVKINEVSKK
VFKNPTIHILKSN

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI94538354, Length=199, Percent_Identity=31.1557788944724, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI46593007, Length=204, Percent_Identity=29.4117647058824, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI24308013, Length=201, Percent_Identity=28.3582089552239, Blast_Score=72, Evalue=7e-13,
Organism=Escherichia coli, GI1787770, Length=333, Percent_Identity=23.7237237237237, Blast_Score=99, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI71999683, Length=401, Percent_Identity=24.9376558603491, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17553678, Length=264, Percent_Identity=23.8636363636364, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI115533970, Length=129, Percent_Identity=31.7829457364341, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323192, Length=204, Percent_Identity=28.921568627451, Blast_Score=100, Evalue=3e-22,
Organism=Drosophila melanogaster, GI21357875, Length=194, Percent_Identity=30.9278350515464, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24646943, Length=194, Percent_Identity=30.9278350515464, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI221513245, Length=294, Percent_Identity=25.1700680272109, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR001431
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 47883; Mature: 47883

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLNFDIKRHKLNNGLEVITINKNTQIPSINIGIKVGALNENLEQKGISHFIEHCLFKG
CEEEECCCEEHHCCCCCEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
TYTRNDEELNSDLEALGGEYNAYTDYEATVYTISCLMEEFKNGVSILSDMIINSKFEESE
CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IEKERGVILAEIRTGKDDLEDYSFKNVNDIAFTKSAFKYEVAGLEENVNKFTREEIKRFY
HHHHCCEEEEEEECCCCHHHHCCCCCCCHHHEEHHHHEEEECCCHHHHHHHHHHHHHHHH
KKYYTPKNSLITMVSPLSHDEAIKLIEDNFSMWTGEKPEHIDVIKEKNKNITKITYKKDI
HHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCC
EQSTIIYLYTFNELEKEDELPLRILNHKLGESANSLLFREVRENRGLAYDIYTNLEISTN
CCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECEEEECC
IKTIYIYTSVAEENLEEAKCAIEQTLNNVIEGKIQICDRDLDVMKKVHKTAVISTLEDSL
EEEEEEEEECHHCCHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHH
ELCNYILHQELEGEDIFEFVKDMERLNNIDKVKINEVSKKVFKNPTIHILKSN
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MIKLNFDIKRHKLNNGLEVITINKNTQIPSINIGIKVGALNENLEQKGISHFIEHCLFKG
CEEEECCCEEHHCCCCCEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
TYTRNDEELNSDLEALGGEYNAYTDYEATVYTISCLMEEFKNGVSILSDMIINSKFEESE
CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IEKERGVILAEIRTGKDDLEDYSFKNVNDIAFTKSAFKYEVAGLEENVNKFTREEIKRFY
HHHHCCEEEEEEECCCCHHHHCCCCCCCHHHEEHHHHEEEECCCHHHHHHHHHHHHHHHH
KKYYTPKNSLITMVSPLSHDEAIKLIEDNFSMWTGEKPEHIDVIKEKNKNITKITYKKDI
HHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCC
EQSTIIYLYTFNELEKEDELPLRILNHKLGESANSLLFREVRENRGLAYDIYTNLEISTN
CCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECEEEECC
IKTIYIYTSVAEENLEEAKCAIEQTLNNVIEGKIQICDRDLDVMKKVHKTAVISTLEDSL
EEEEEEEEECHHCCHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHH
ELCNYILHQELEGEDIFEFVKDMERLNNIDKVKINEVSKKVFKNPTIHILKSN
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]