| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933766
Identifier: 187933766
GI number: 187933766
Start: 1926244
End: 1927131
Strand: Reverse
Name: 187933766
Synonym: CLL_A1837
Alternate gene names: NA
Gene position: 1927131-1926244 (Counterclockwise)
Preceding gene: 187933128
Following gene: 187934371
Centisome position: 50.71
GC content: 23.76
Gene sequence:
>888_bases ATGAAAAATATTATTTTAAAAAATCTAGTACTATTAACATCTATATTTATAAGTACATTATGGCTTATAGGATGCAATAA CTTAAATTCAACAAGTAAATCTACAGATGGAATAAACATAATTGATGAAAAAGAATTGAAAAATGTTCCATTTGAAGTAA AGGTATTAAATACAGAAAAATCAGATTGTATTTTAATTAAAATTAATGATAAAGCAATTATGATTGACACTGGATTAAAT AAAAATGGTAAACAGATTTGTGATTTATTAAAAGAAAATAATATAGATACATTAGAATATCTTATAATAACTCATTTAGA TAAAGATCATATAGGTGGTGCTGATGCTGTATTAAATGATATAAAAGTTAATAACTTAATACAATCTGACTATGTTAAAG ACAGTAAACAGTATAATCAATATGTAAATGCAATAAATACAAATAACATGGCTCCAACAATGCCTCATGAAGATATTCAT GTACAAATAGGAGATGCTAAAATAAAAATATCTCCTGCTTTAAAATATAAATACGAAAAATCAAATGATTATTCTATTAT AGTTAGTATAGAATATGGAAAATATAACTTCTTATTTGCAGGTGATGCTGAGGAAGAACGATTAGCAGAATTTTTAAGTA ATAACAATGAAAATTATACAGTTTTAAAGTTACCTCATCATGGTAGATATAATGGTTTAAGTGAGAAATTCTTAAAATCA GTTTCTCCAATATATAGTGTAATTACATGTTCAGAAGAGGAAATGCCAGATAATGAAATTGTTTCTATATTGTCATCAAT AAAATCAAAAACATTTCTTACTAAAGATGGAGATGTTACAATAAAAACAGATGGAGAATCTATAAGTATAGACCAAAATA ATATATAA
Upstream 100 bases:
>100_bases ATGTGGTTTTTACACATTATTATCACATAAATTTGTTATAATAAAAATTAATTATTTAGTGTATAAATACGTTAAGGATT TAAGAAAGTGAGAATGTAAA
Downstream 100 bases:
>100_bases AAGGGGAGATTTTAATGAATTGGATTAAAGAAATAGAGGATTATAATCCATATAATGAACAGGAAGCTAGTGATAAAAAA TTTATATTGAACTGTATAAA
Product: metallo-beta-lactamase superfamily exported protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; ComE-Like Protein; Metallo-Beta-Lactamase Superfamily Exported Protein; Late Competence Protein; Metallo Beta-Lactamase Family Protein; Metallo-Beta-Lactamase; Beta-Lactamase-Like Protein; ComE Operon Protein; Competence-Like Protein; S-Layer Protein; ComE Operon; Metallo-Beta-Lactamase Domain Protein; Hydrolase; Copper Amine Oxidase Domain Protein; Late Competence Protein ComEC; Metallo Beta-Lactamase Superfamily Lipoprotein; Beta-Lactamase Domain Lipoprotein; Beta-Lactamase-Like; Metallo Beta-Lactamase; ComEC/Rec2-Related Protein; Metallo Beta-Lactamase Domain Protein; ComE-Like Competence Protein; Transforming DNA Uptake Protein; Hydrolase Of Metallo-Beta-Lactamase Fold; DNA Internalization Competence; Metallo-Beta-Lactamase Superfamily Protein; DNA Internalization-Related Competence Protein ComEC; Metallo Beta-Lactamase Superfamily Hydrolase; Metallo Beta Lactamase SLH Domain-Containing Protein; DNA Internalization Competence Protein; Metallo-Beta-Lactamase Superfamily Hydrolase-Like Protein; Competence Protein ComEC; Competence -Related Protein
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKNIILKNLVLLTSIFISTLWLIGCNNLNSTSKSTDGINIIDEKELKNVPFEVKVLNTEKSDCILIKINDKAIMIDTGLN KNGKQICDLLKENNIDTLEYLIITHLDKDHIGGADAVLNDIKVNNLIQSDYVKDSKQYNQYVNAINTNNMAPTMPHEDIH VQIGDAKIKISPALKYKYEKSNDYSIIVSIEYGKYNFLFAGDAEEERLAEFLSNNNENYTVLKLPHHGRYNGLSEKFLKS VSPIYSVITCSEEEMPDNEIVSILSSIKSKTFLTKDGDVTIKTDGESISIDQNNI
Sequences:
>Translated_295_residues MKNIILKNLVLLTSIFISTLWLIGCNNLNSTSKSTDGINIIDEKELKNVPFEVKVLNTEKSDCILIKINDKAIMIDTGLN KNGKQICDLLKENNIDTLEYLIITHLDKDHIGGADAVLNDIKVNNLIQSDYVKDSKQYNQYVNAINTNNMAPTMPHEDIH VQIGDAKIKISPALKYKYEKSNDYSIIVSIEYGKYNFLFAGDAEEERLAEFLSNNNENYTVLKLPHHGRYNGLSEKFLKS VSPIYSVITCSEEEMPDNEIVSILSSIKSKTFLTKDGDVTIKTDGESISIDQNNI >Mature_295_residues MKNIILKNLVLLTSIFISTLWLIGCNNLNSTSKSTDGINIIDEKELKNVPFEVKVLNTEKSDCILIKINDKAIMIDTGLN KNGKQICDLLKENNIDTLEYLIITHLDKDHIGGADAVLNDIKVNNLIQSDYVKDSKQYNQYVNAINTNNMAPTMPHEDIH VQIGDAKIKISPALKYKYEKSNDYSIIVSIEYGKYNFLFAGDAEEERLAEFLSNNNENYTVLKLPHHGRYNGLSEKFLKS VSPIYSVITCSEEEMPDNEIVSILSSIKSKTFLTKDGDVTIKTDGESISIDQNNI
Specific function: Unknown
COG id: COG2333
COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33216; Mature: 33216
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIILKNLVLLTSIFISTLWLIGCNNLNSTSKSTDGINIIDEKELKNVPFEVKVLNTEK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHCCCCEEEEEEECCC SDCILIKINDKAIMIDTGLNKNGKQICDLLKENNIDTLEYLIITHLDKDHIGGADAVLND CCEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCHHCCCHHHHHHH IKVNNLIQSDYVKDSKQYNQYVNAINTNNMAPTMPHEDIHVQIGDAKIKISPALKYKYEK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEEEEEEEEEEEEC SNDYSIIVSIEYGKYNFLFAGDAEEERLAEFLSNNNENYTVLKLPHHGRYNGLSEKFLKS CCCEEEEEEEEECCEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH VSPIYSVITCSEEEMPDNEIVSILSSIKSKTFLTKDGDVTIKTDGESISIDQNNI HHHHHHEEECCCCCCCHHHHHHHHHHHHHCEEEECCCCEEEEECCCEEECCCCCC >Mature Secondary Structure MKNIILKNLVLLTSIFISTLWLIGCNNLNSTSKSTDGINIIDEKELKNVPFEVKVLNTEK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHCCCCEEEEEEECCC SDCILIKINDKAIMIDTGLNKNGKQICDLLKENNIDTLEYLIITHLDKDHIGGADAVLND CCEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCHHCCCHHHHHHH IKVNNLIQSDYVKDSKQYNQYVNAINTNNMAPTMPHEDIHVQIGDAKIKISPALKYKYEK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEEEEEEEEEEEEC SNDYSIIVSIEYGKYNFLFAGDAEEERLAEFLSNNNENYTVLKLPHHGRYNGLSEKFLKS CCCEEEEEEEEECCEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH VSPIYSVITCSEEEMPDNEIVSILSSIKSKTFLTKDGDVTIKTDGESISIDQNNI HHHHHHEEECCCCCCCHHHHHHHHHHHHHCEEEECCCCEEEEECCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA