| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933716
Identifier: 187933716
GI number: 187933716
Start: 2837984
End: 2838811
Strand: Reverse
Name: 187933716
Synonym: CLL_A2730
Alternate gene names: NA
Gene position: 2838811-2837984 (Counterclockwise)
Preceding gene: 187932721
Following gene: 187934128
Centisome position: 74.7
GC content: 28.74
Gene sequence:
>828_bases ATGCGGTATGGAATAAGAGAAAGACTATTACAAAGTATTCCAGAATTAAAAGGGTGCTATGAACCTAATATTCCAGAAAA ACAGACGATTAAACCATATGCAATTATTCTACAAAATGATGATACTAAAAATAATCAAGCAGTGGGATTTAAAAGAACTA TTGAGATTTATATTTACAATGAGAGAACATCTTTTAATTATGTGGATGCATTAATGGGGAAAGTAATTAAAACATTGAAT ATGCAGACTATTGAGGATACTAAAACAGGAGAAATATTTACATGCATATTTAATGGAATAATCGGTCAAGATGGTGTTGA TGAAGATTGGGACGCAATATATAGAGGATTACAGTTTACTGTTATATCCTTACATGAAGAAAATGAAGTTAATACAGATA AGTGGTTAGATGCTCTGAGCGATTATACCAAAGACATTATTAAATTACCTATTTATCTTAATAATTGGAAACAAAACTTT GAAGTACCATCAATTCTATGGAGAGTACAAGATCAGGAAAAAGAAAGAGAATCAAATGCTCTTATAAAAGAAAGTAAAAC TCTTATATGCCATATAGCCAGTAATAATAAAAATGAAATTAATGAGTTATTGGATAATATAGAAGATAATTTGATTTCTG ATTTGAAAATACTATTTGATTTAGCAGACAGGCGTTATCTTACTATAGAAAGTATAGAAGAAGATAGAGAAGCAGACATG CTAAGTAAGGGACAATTAACAGTAAAGGTATATAAGAGAAAAATGATTAGAAGAAAAGAAGTTCCTAAAATAAATAAAAT TTATGGATCCGGAATATTGAAGGAGTGA
Upstream 100 bases:
>100_bases AAGTATAAAAGGAATGAAAGCTAGGCCAGTTCTTAAAGATATACTTAATGAAAACAAATCATTAATAATAAATACAATTG AAAAATATTGGAGTGATTAA
Downstream 100 bases:
>100_bases TGAAGTTGACTGATGAAAAGGCAACTACAACAATTAATAAAACTGCTGTTGTAAATGAAGCAACCTACCCAATACAAGTA TTTATAGATAATGCAGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MRYGIRERLLQSIPELKGCYEPNIPEKQTIKPYAIILQNDDTKNNQAVGFKRTIEIYIYNERTSFNYVDALMGKVIKTLN MQTIEDTKTGEIFTCIFNGIIGQDGVDEDWDAIYRGLQFTVISLHEENEVNTDKWLDALSDYTKDIIKLPIYLNNWKQNF EVPSILWRVQDQEKERESNALIKESKTLICHIASNNKNEINELLDNIEDNLISDLKILFDLADRRYLTIESIEEDREADM LSKGQLTVKVYKRKMIRRKEVPKINKIYGSGILKE
Sequences:
>Translated_275_residues MRYGIRERLLQSIPELKGCYEPNIPEKQTIKPYAIILQNDDTKNNQAVGFKRTIEIYIYNERTSFNYVDALMGKVIKTLN MQTIEDTKTGEIFTCIFNGIIGQDGVDEDWDAIYRGLQFTVISLHEENEVNTDKWLDALSDYTKDIIKLPIYLNNWKQNF EVPSILWRVQDQEKERESNALIKESKTLICHIASNNKNEINELLDNIEDNLISDLKILFDLADRRYLTIESIEEDREADM LSKGQLTVKVYKRKMIRRKEVPKINKIYGSGILKE >Mature_275_residues MRYGIRERLLQSIPELKGCYEPNIPEKQTIKPYAIILQNDDTKNNQAVGFKRTIEIYIYNERTSFNYVDALMGKVIKTLN MQTIEDTKTGEIFTCIFNGIIGQDGVDEDWDAIYRGLQFTVISLHEENEVNTDKWLDALSDYTKDIIKLPIYLNNWKQNF EVPSILWRVQDQEKERESNALIKESKTLICHIASNNKNEINELLDNIEDNLISDLKILFDLADRRYLTIESIEEDREADM LSKGQLTVKVYKRKMIRRKEVPKINKIYGSGILKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32179; Mature: 32179
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYGIRERLLQSIPELKGCYEPNIPEKQTIKPYAIILQNDDTKNNQAVGFKRTIEIYIYN CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEECEEEEEEEEEEE ERTSFNYVDALMGKVIKTLNMQTIEDTKTGEIFTCIFNGIIGQDGVDEDWDAIYRGLQFT CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEHHHHCCCCCCCCCHHHHHCCCEEE VISLHEENEVNTDKWLDALSDYTKDIIKLPIYLNNWKQNFEVPSILWRVQDQEKERESNA EEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCHHHHHHHHH LIKESKTLICHIASNNKNEINELLDNIEDNLISDLKILFDLADRRYLTIESIEEDREADM HHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH LSKGQLTVKVYKRKMIRRKEVPKINKIYGSGILKE HHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCC >Mature Secondary Structure MRYGIRERLLQSIPELKGCYEPNIPEKQTIKPYAIILQNDDTKNNQAVGFKRTIEIYIYN CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEECEEEEEEEEEEE ERTSFNYVDALMGKVIKTLNMQTIEDTKTGEIFTCIFNGIIGQDGVDEDWDAIYRGLQFT CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEHHHHCCCCCCCCCHHHHHCCCEEE VISLHEENEVNTDKWLDALSDYTKDIIKLPIYLNNWKQNFEVPSILWRVQDQEKERESNA EEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCHHHHHHHHH LIKESKTLICHIASNNKNEINELLDNIEDNLISDLKILFDLADRRYLTIESIEEDREADM HHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH LSKGQLTVKVYKRKMIRRKEVPKINKIYGSGILKE HHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA