Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
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Accession | NC_010674 |
Length | 3,800,327 |
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The map label for this gene is 187933672
Identifier: 187933672
GI number: 187933672
Start: 2269258
End: 2269764
Strand: Reverse
Name: 187933672
Synonym: CLL_A2181
Alternate gene names: NA
Gene position: 2269764-2269258 (Counterclockwise)
Preceding gene: 187933264
Following gene: 187932819
Centisome position: 59.73
GC content: 28.6
Gene sequence:
>507_bases ATGAATATTAAAGAGTTTGAAAAAAGTGATGTGTTTACTTTTGAAGCAAAATGCACTCTTTGGAATAAAGAAAATATTGG TTTTGGAGTTGATTTTCCAGATGAAAGAAAAGGTGAAAATTTGGAAATTTTATCTAAACATTTAAGTGATATAGAAAAGC AATTAAAATGGATTGAAGAAAATAGAAGATGTATTGAAAAAACTTTACTTGATGATGATATGGTTTCTCTTGCAGAAGAC TGGGCATCATCTTCAGAGGAAGCCGAAGATGAAGAACAAGAATGTTATCTAATGGAGGATGATCAAAAAGTTTTTTTACC AATTTCTGATGAAGATTTTTGTAAAAGTCTCTATATAGATGGATTTAGTATTAATTTTGAAGATGGATGGGACAAGCCTA ATATAGACCTGTATTTATGTTGTTCACCAGATTATTTTGCATATCATTGTATTAGCATATCTATTGATGAAAATAAAAGT GTTGAATGTAATAATCTTGCAGGATAA
Upstream 100 bases:
>100_bases TGAAGGCGTAATTTTAACAATGGCAATTGTTTTATTTTTTAGAAATAAATCTAAAACAAGCAATTATTAAAGTATAAGTG AATAATAGGGGGAAGTATCA
Downstream 100 bases:
>100_bases CGAATAAAAATGAGCTATTAATGAATATAGGGGGAAAATATGTATACAAAAAATGAAATTTTAGAGATTGCTAAGTCTCA GTTAGCACTGGATTATAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MNIKEFEKSDVFTFEAKCTLWNKENIGFGVDFPDERKGENLEILSKHLSDIEKQLKWIEENRRCIEKTLLDDDMVSLAED WASSSEEAEDEEQECYLMEDDQKVFLPISDEDFCKSLYIDGFSINFEDGWDKPNIDLYLCCSPDYFAYHCISISIDENKS VECNNLAG
Sequences:
>Translated_168_residues MNIKEFEKSDVFTFEAKCTLWNKENIGFGVDFPDERKGENLEILSKHLSDIEKQLKWIEENRRCIEKTLLDDDMVSLAED WASSSEEAEDEEQECYLMEDDQKVFLPISDEDFCKSLYIDGFSINFEDGWDKPNIDLYLCCSPDYFAYHCISISIDENKS VECNNLAG >Mature_168_residues MNIKEFEKSDVFTFEAKCTLWNKENIGFGVDFPDERKGENLEILSKHLSDIEKQLKWIEENRRCIEKTLLDDDMVSLAED WASSSEEAEDEEQECYLMEDDQKVFLPISDEDFCKSLYIDGFSINFEDGWDKPNIDLYLCCSPDYFAYHCISISIDENKS VECNNLAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19591; Mature: 19591
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKEFEKSDVFTFEAKCTLWNKENIGFGVDFPDERKGENLEILSKHLSDIEKQLKWIEE CCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH NRRCIEKTLLDDDMVSLAEDWASSSEEAEDEEQECYLMEDDQKVFLPISDEDFCKSLYID HHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCHHHHHHHEEC GFSINFEDGWDKPNIDLYLCCSPDYFAYHCISISIDENKSVECNNLAG CEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MNIKEFEKSDVFTFEAKCTLWNKENIGFGVDFPDERKGENLEILSKHLSDIEKQLKWIEE CCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH NRRCIEKTLLDDDMVSLAEDWASSSEEAEDEEQECYLMEDDQKVFLPISDEDFCKSLYID HHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCHHHHHHHEEC GFSINFEDGWDKPNIDLYLCCSPDYFAYHCISISIDENKSVECNNLAG CEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA