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The map label for this gene is ybhK [C]

Identifier: 187933632

GI number: 187933632

Start: 3518255

End: 3519616

Strand: Reverse

Name: ybhK [C]

Synonym: CLL_A3341

Alternate gene names: 187933632

Gene position: 3519616-3518255 (Counterclockwise)

Preceding gene: 187932869

Following gene: 187935284

Centisome position: 92.61

GC content: 28.71

Gene sequence:

>1362_bases
ATGAGGATAAAGGAATTAATTAAACCGGGAATCAAAGTTAAGAGGTGGCTCTTCTTTGGTATATTTGGGATATTATTAAT
TGCATTTGGATTTACGGAATTGGTGACTCATAGGGTATATGACTTATATTATAGAATATTTTACGTACTTTTAAATATTA
CAGGAATTTTTGTTATATATATTTCAGTAAGTGAGAGTATGAAATCAATAATAGCATTAGTAAATAGAGGATATATAAAA
GTATCTTTTGATAGTAAAAAGATAGAAAGTTTTATAGAAGAAAAGAGATTATTAATAAAAGGACCTAAGATAGTAGTTAT
AGGGGGTGGAACAGGTCTTTCTACTATGCTTAGGGGACTTAAGTACTATACATCTAATATAACTGCAATAGTAACAGTTG
CTGATGATGGTGGTGGATCTGGAGATTTAAGAGAAGACTTAGGAATGCTTCCACCAGGAGATATAAGAAACTGTATATTA
GCTTTAGCAGATACAGAGCCTATAATGGAGAATTTACTTCAATATAGATTTAAAGAAGGAAAACTAAAAAACCAAAGCTT
TGGTAATTTATTTTTAGCAGCAATGGATGGCATTTCTGATAATTTTGAAGAAGCGGTACAAAAAATGAGTTCTGTATTAG
CAGTTACAGGAAAAGTTGTTCCAGTAACTTTAGATAATATGGAACTTGAAGCAACCCTTAAAAATGGAAAAGTAATTAGG
GGAGAATCTCAAATACCTGAAGAAGCTATAAAACAAAATTCAAAAATAAGAAATTTTAGGATTATACCTGAAGATGCAAA
GCCATTAAAAGAAGCTATAGAAGCTATAAGAGAAGCTGATGCTATAGTTATGGGACCAGGAAGTCTTTATACAAGTATAA
TACCTAATTTATTAGTAAAAGATATAGCAAAAGAAGTAAGAAAAAGTGATGCATTAAAGTTTTATATATCTAATATAATG
ACACAGCCAGGTGAAACTACAAAGTTTAAAGTATCAGATCACTTAAAGGTATTACAAAAATATGGTGGCAAAGATATAGT
AAATTATGTTGTTGCTAATGTTGGTGAAGTGGAAAATGAATTAAAAGAAAAGTATAAATTAGAAGATGCTGAGTTAGTTA
AATTAGATAGTGAAGCTGTAAATAACTTGGGAATAAAAATAATTGGTTACAATTTAGTGAAAGTAAGTAAGGGATTTATA
AAGCATGATGCTGATAAATTAGCTCAAGTTTTAGTTGATACTATCATGGAAAAGAAATTGTTATATGATAAGAAAAAGAT
AATAGAATATATGTACTTATCTCAGCGTATTAAAGAAAGAGTAAAAGAAGAGAAAACTAAATCAATTCTAAAAAATTTAT
AG

Upstream 100 bases:

>100_bases
TTGCTAATGAGATTTATGAAAGATTAAATAAAGGAAATTACAAAGCAAAGATAGAGCATAGAGATGTTGGTGAAGATCTT
CATAGAGGAGAAAAGAAACT

Downstream 100 bases:

>100_bases
ATAAGGGGAAATAGGATGTCATTTTCATCTAAAGTTAAAGGCGAAATATGTAGATATGTGGATATGTGCAAAGAAGATGC
ATTAGCAGAAATATCTGCAA

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MRIKELIKPGIKVKRWLFFGIFGILLIAFGFTELVTHRVYDLYYRIFYVLLNITGIFVIYISVSESMKSIIALVNRGYIK
VSFDSKKIESFIEEKRLLIKGPKIVVIGGGTGLSTMLRGLKYYTSNITAIVTVADDGGGSGDLREDLGMLPPGDIRNCIL
ALADTEPIMENLLQYRFKEGKLKNQSFGNLFLAAMDGISDNFEEAVQKMSSVLAVTGKVVPVTLDNMELEATLKNGKVIR
GESQIPEEAIKQNSKIRNFRIIPEDAKPLKEAIEAIREADAIVMGPGSLYTSIIPNLLVKDIAKEVRKSDALKFYISNIM
TQPGETTKFKVSDHLKVLQKYGGKDIVNYVVANVGEVENELKEKYKLEDAELVKLDSEAVNNLGIKIIGYNLVKVSKGFI
KHDADKLAQVLVDTIMEKKLLYDKKKIIEYMYLSQRIKERVKEEKTKSILKNL

Sequences:

>Translated_453_residues
MRIKELIKPGIKVKRWLFFGIFGILLIAFGFTELVTHRVYDLYYRIFYVLLNITGIFVIYISVSESMKSIIALVNRGYIK
VSFDSKKIESFIEEKRLLIKGPKIVVIGGGTGLSTMLRGLKYYTSNITAIVTVADDGGGSGDLREDLGMLPPGDIRNCIL
ALADTEPIMENLLQYRFKEGKLKNQSFGNLFLAAMDGISDNFEEAVQKMSSVLAVTGKVVPVTLDNMELEATLKNGKVIR
GESQIPEEAIKQNSKIRNFRIIPEDAKPLKEAIEAIREADAIVMGPGSLYTSIIPNLLVKDIAKEVRKSDALKFYISNIM
TQPGETTKFKVSDHLKVLQKYGGKDIVNYVVANVGEVENELKEKYKLEDAELVKLDSEAVNNLGIKIIGYNLVKVSKGFI
KHDADKLAQVLVDTIMEKKLLYDKKKIIEYMYLSQRIKERVKEEKTKSILKNL
>Mature_453_residues
MRIKELIKPGIKVKRWLFFGIFGILLIAFGFTELVTHRVYDLYYRIFYVLLNITGIFVIYISVSESMKSIIALVNRGYIK
VSFDSKKIESFIEEKRLLIKGPKIVVIGGGTGLSTMLRGLKYYTSNITAIVTVADDGGGSGDLREDLGMLPPGDIRNCIL
ALADTEPIMENLLQYRFKEGKLKNQSFGNLFLAAMDGISDNFEEAVQKMSSVLAVTGKVVPVTLDNMELEATLKNGKVIR
GESQIPEEAIKQNSKIRNFRIIPEDAKPLKEAIEAIREADAIVMGPGSLYTSIIPNLLVKDIAKEVRKSDALKFYISNIM
TQPGETTKFKVSDHLKVLQKYGGKDIVNYVVANVGEVENELKEKYKLEDAELVKLDSEAVNNLGIKIIGYNLVKVSKGFI
KHDADKLAQVLVDTIMEKKLLYDKKKIIEYMYLSQRIKERVKEEKTKSILKNL

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=253, Percent_Identity=32.8063241106719, Blast_Score=132, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 50937; Mature: 50937

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKELIKPGIKVKRWLFFGIFGILLIAFGFTELVTHRVYDLYYRIFYVLLNITGIFVIY
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
ISVSESMKSIIALVNRGYIKVSFDSKKIESFIEEKRLLIKGPKIVVIGGGTGLSTMLRGL
EEHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHEEECCEEEEEECCCCHHHHHHHH
KYYTSNITAIVTVADDGGGSGDLREDLGMLPPGDIRNCILALADTEPIMENLLQYRFKEG
HHHHCCCEEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCC
KLKNQSFGNLFLAAMDGISDNFEEAVQKMSSVLAVTGKVVPVTLDNMELEATLKNGKVIR
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCEEEE
GESQIPEEAIKQNSKIRNFRIIPEDAKPLKEAIEAIREADAIVMGPGSLYTSIIPNLLVK
CCCCCCHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHH
DIAKEVRKSDALKFYISNIMTQPGETTKFKVSDHLKVLQKYGGKDIVNYVVANVGEVENE
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKEKYKLEDAELVKLDSEAVNNLGIKIIGYNLVKVSKGFIKHDADKLAQVLVDTIMEKKL
HHHHHCCCCHHHEEECHHHHHCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LYDKKKIIEYMYLSQRIKERVKEEKTKSILKNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIKELIKPGIKVKRWLFFGIFGILLIAFGFTELVTHRVYDLYYRIFYVLLNITGIFVIY
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
ISVSESMKSIIALVNRGYIKVSFDSKKIESFIEEKRLLIKGPKIVVIGGGTGLSTMLRGL
EEHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHEEECCEEEEEECCCCHHHHHHHH
KYYTSNITAIVTVADDGGGSGDLREDLGMLPPGDIRNCILALADTEPIMENLLQYRFKEG
HHHHCCCEEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCC
KLKNQSFGNLFLAAMDGISDNFEEAVQKMSSVLAVTGKVVPVTLDNMELEATLKNGKVIR
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCEEEE
GESQIPEEAIKQNSKIRNFRIIPEDAKPLKEAIEAIREADAIVMGPGSLYTSIIPNLLVK
CCCCCCHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHH
DIAKEVRKSDALKFYISNIMTQPGETTKFKVSDHLKVLQKYGGKDIVNYVVANVGEVENE
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKEKYKLEDAELVKLDSEAVNNLGIKIIGYNLVKVSKGFIKHDADKLAQVLVDTIMEKKL
HHHHHCCCCHHHEEECHHHHHCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LYDKKKIIEYMYLSQRIKERVKEEKTKSILKNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]