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The map label for this gene is 187933421

Identifier: 187933421

GI number: 187933421

Start: 1280645

End: 1281013

Strand: Reverse

Name: 187933421

Synonym: CLL_A1253

Alternate gene names: NA

Gene position: 1281013-1280645 (Counterclockwise)

Preceding gene: 187935768

Following gene: 187933262

Centisome position: 33.71

GC content: 19.51

Gene sequence:

>369_bases
ATGAAGAAATTTAATAAAGACATAGGAACTTATTGCGAAAAATTATCATGTGATTATTTAATAGAGCATAATTTTAAAAT
ACTTGAATGTAACTTTAAAAATTTTCTAGGAGAAATAGATATTATATGTATAAAAAATTCTATATTAATAATAATAGAAG
TGAAAGGTAGATATAATTATGAATTTGGACTTCCAAAAGAGTCCGTATCTATAAGTAAGCAAAAAAACATTATAAAAGTT
ACAAAATCCTATATAAATTATAAAAAACTTTATAATTTTAATGTACGTTTTGATGTTATAGAAATATATCTGAATAAACT
TAATTCATCTTATAAGATTAATCATATAAAAGATGCTTTTAGAACTTAA

Upstream 100 bases:

>100_bases
GTCAATAATATTTACTATATTTTGTATATTATTATTCTTAACATAATTTTTATATTACATTTAACAAAAAAAAATTTACA
TCTTTAAGGAGCTTATATTA

Downstream 100 bases:

>100_bases
AAATACCTTGTAAAATAATTCCCCATTATTTTACAAGGTATTTGTTATAATATATTATTTAAAAAACTATTTCTATGTAT
TTCACATTTTCCATATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKKFNKDIGTYCEKLSCDYLIEHNFKILECNFKNFLGEIDIICIKNSILIIIEVKGRYNYEFGLPKESVSISKQKNIIKV
TKSYINYKKLYNFNVRFDVIEIYLNKLNSSYKINHIKDAFRT

Sequences:

>Translated_122_residues
MKKFNKDIGTYCEKLSCDYLIEHNFKILECNFKNFLGEIDIICIKNSILIIIEVKGRYNYEFGLPKESVSISKQKNIIKV
TKSYINYKKLYNFNVRFDVIEIYLNKLNSSYKINHIKDAFRT
>Mature_122_residues
MKKFNKDIGTYCEKLSCDYLIEHNFKILECNFKNFLGEIDIICIKNSILIIIEVKGRYNYEFGLPKESVSISKQKNIIKV
TKSYINYKKLYNFNVRFDVIEIYLNKLNSSYKINHIKDAFRT

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 14538; Mature: 14538

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFNKDIGTYCEKLSCDYLIEHNFKILECNFKNFLGEIDIICIKNSILIIIEVKGRYNY
CCCCHHHHHHHHHHCCCCEEEECCEEEEEECHHHHCCCEEEEEECCCEEEEEEECCCEEE
EFGLPKESVSISKQKNIIKVTKSYINYKKLYNFNVRFDVIEIYLNKLNSSYKINHIKDAF
EECCCCCCCCCCCCCHHHHHHHHHHCHHHEEECCCEEHHHHHHHHHCCCCEEEHHHHHHH
RT
CC
>Mature Secondary Structure
MKKFNKDIGTYCEKLSCDYLIEHNFKILECNFKNFLGEIDIICIKNSILIIIEVKGRYNY
CCCCHHHHHHHHHHCCCCEEEECCEEEEEECHHHHCCCEEEEEECCCEEEEEEECCCEEE
EFGLPKESVSISKQKNIIKVTKSYINYKKLYNFNVRFDVIEIYLNKLNSSYKINHIKDAF
EECCCCCCCCCCCCCHHHHHHHHHHCHHHEEECCCEEHHHHHHHHHCCCCEEEHHHHHHH
RT
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA