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The map label for this gene is yddQ [H]

Identifier: 187933276

GI number: 187933276

Start: 2249078

End: 2249599

Strand: Reverse

Name: yddQ [H]

Synonym: CLL_A2160

Alternate gene names: 187933276

Gene position: 2249599-2249078 (Counterclockwise)

Preceding gene: 187932453

Following gene: 187932441

Centisome position: 59.19

GC content: 26.25

Gene sequence:

>522_bases
ATGGTTTTATTAGTTGTTGATACACAGAAATTAATAACAAATGAAAATTTATATAAATTCAATAAATTTGTGTCAAATAT
AGAAAAAATAATTGCTACAGCGAGGCAAAATAATATAGAAATAATATATGTACGCCATGATGATGGTGCTGAAAATGAAT
TAACAAAAGGAACTGAAGGTTTTGAAATATATGAAAAATTCATACCATCTAAAGAAGAAAAAATATTTGATAAAAAAGTA
AATAGTGCTTTTAAAGATACTGGTTTATTAGAATATTTAATAAGTAAAGGCAAAAAGGATATAATTATTGTAGGACTTCA
AACAGATTATTGTATTGATGCTACTATAAAATGTGGATTTGAACATGGATTTCACATGATAGTTCCAGCTTATTCAAATA
CAACAGTTGAAAATAAGTTTATGTCAGCAGAGCAAACATACAGATATTATAATGAATTTATTTGGAATGGTAGATATGCA
GAATGTATTCCCCTGGAACAAGCACTCAAAATGATGAGATAG

Upstream 100 bases:

>100_bases
ATGAAATTGCTGAAGGTGGTAATGTAAAACAAAGATATTGGATTCAATTATGAGAATAACACAAATGTGATAAAGTCTAA
TTTGTAAGGGGGATAAATAA

Downstream 100 bases:

>100_bases
ATTTTAATTTAAATTTGCAAAAACTTTATAAACAGGGAAGGCAAGGCATAGAGTGTATTATAGAAATCTTGAATTAAGTG
ATATGGACAAGATAGAAGAA

Product: isochorismatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MVLLVVDTQKLITNENLYKFNKFVSNIEKIIATARQNNIEIIYVRHDDGAENELTKGTEGFEIYEKFIPSKEEKIFDKKV
NSAFKDTGLLEYLISKGKKDIIIVGLQTDYCIDATIKCGFEHGFHMIVPAYSNTTVENKFMSAEQTYRYYNEFIWNGRYA
ECIPLEQALKMMR

Sequences:

>Translated_173_residues
MVLLVVDTQKLITNENLYKFNKFVSNIEKIIATARQNNIEIIYVRHDDGAENELTKGTEGFEIYEKFIPSKEEKIFDKKV
NSAFKDTGLLEYLISKGKKDIIIVGLQTDYCIDATIKCGFEHGFHMIVPAYSNTTVENKFMSAEQTYRYYNEFIWNGRYA
ECIPLEQALKMMR
>Mature_173_residues
MVLLVVDTQKLITNENLYKFNKFVSNIEKIIATARQNNIEIIYVRHDDGAENELTKGTEGFEIYEKFIPSKEEKIFDKKV
NSAFKDTGLLEYLISKGKKDIIIVGLQTDYCIDATIKCGFEHGFHMIVPAYSNTTVENKFMSAEQTYRYYNEFIWNGRYA
ECIPLEQALKMMR

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20136; Mature: 20136

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLVVDTQKLITNENLYKFNKFVSNIEKIIATARQNNIEIIYVRHDDGAENELTKGTEG
CEEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHCCCCCH
FEIYEKFIPSKEEKIFDKKVNSAFKDTGLLEYLISKGKKDIIIVGLQTDYCIDATIKCGF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECC
EHGFHMIVPAYSNTTVENKFMSAEQTYRYYNEFIWNGRYAECIPLEQALKMMR
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHCC
>Mature Secondary Structure
MVLLVVDTQKLITNENLYKFNKFVSNIEKIIATARQNNIEIIYVRHDDGAENELTKGTEG
CEEEEEECHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHCCCCCH
FEIYEKFIPSKEEKIFDKKVNSAFKDTGLLEYLISKGKKDIIIVGLQTDYCIDATIKCGF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECC
EHGFHMIVPAYSNTTVENKFMSAEQTYRYYNEFIWNGRYAECIPLEQALKMMR
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]