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The map label for this gene is mcp4 [H]

Identifier: 187933248

GI number: 187933248

Start: 3438996

End: 3440462

Strand: Reverse

Name: mcp4 [H]

Synonym: CLL_A3277

Alternate gene names: 187933248

Gene position: 3440462-3438996 (Counterclockwise)

Preceding gene: 187932494

Following gene: 187935364

Centisome position: 90.53

GC content: 26.31

Gene sequence:

>1467_bases
ATGGATAACCAAAGAATCATTAACACAAAAAATAAAATTTTGCTTGCATTATTTTTAAGTTCAATTTTATTAAGGGGAAT
ATTTGATTATTATTTAAAAGTACCTATAAGATCAGTTATATCAATAGTAGGGTCAGGAATAATATTAAGTATTATACAGC
TTATCTTAATAAAGAAAAATTGTGTGAAGCAATCAATGTACTTCATGGTATTTTCAATATCAGCAATTGGTGTTATATTG
ATGAGCACATCACCAACTTTATCTAATTTAATGATATTTTATTCAGCAATTTTTTTAATTATATTATATCAAGAAACAAT
TCCAATAGTTCTTCAATGTATATCTAGTACTGTTTTTATGAGTTATTTTTTTATAAAGAATAAAGAAACAATATTTTCAA
ATATAGGGTATGATCAATTAGTGTTTTTAATTCTATATATTGGAAGTGGATTGCTTATATGTACATTATTATGCATAATA
ACAAAACGTACTTATATTACATTAGAAGAAAAAATTAAAGAAAGTAATGAAGCAAAATCTAAGACTGAGCTTTTATTAAG
TAATCTTAGTGAAACAATAGAAGCTTTAAATGAAGCAAGTTGTACTATTAGTGAAGGTATTAATACAACAGCGGAAGTAT
CAGAACAGATATCAGTTGCTTCAAATGAAGTTGCAAATAAAGCAACAAGAGAAGTTGAAACAATGAACAATATTCAATCG
TTTATGCGAAGTGGAGAACAGGGATTAGAAGAAGTAACAAGTGCAGTGGAAATTATGTCGGAATTATCATCGTCTACAAA
GGATGTTGTTTTACAAGGTGCTAGTAAGGTTGATGATTTATCAAGTGAGATGACTAAAGTAAAAGATAATATTATAAGCA
CTGTTAAGTTAATTAATAATTTAAATGAAGAAAATTTAAAGATAGTAAAAATTATAGATACGGTAAGCGAAATAGCAGGA
CAAACAAATCTTTTAGCACTTAATGCATCAATAGAAGCAGCAAGAGCAGGAGAACATGGTAAAGGTTTTGCAGTTGTTGC
AGATGAAGTCAAAAAATTAGCAGAAAACTCTAAAGAATCAACAAATCAAATAATATCTATATTAAATAGTATATCTGAAA
GAACTAATGCTGTATCAGATGAAATAGTAAAAGAAAAGAAATCAATAGAAGTGTGTAATGAACATACCGATATAGTAAAA
GATTTATTTAAGAATATAAATAATAATACAGGAAATGTATTAAATCATTCAGATAGTGTAAATCAACAAATTAAAGGATT
AGTTACTGTATTTTCAAAGACAGCAACAGAAATAGATAGTATAAGTGAAAATGTTGAAACTACAGCATCAGCTATGGAGG
AAATATCAGCTAATATTAGTGAACTTAACAACAATATAGATGGGATATCTAATACATATAAAAATATAGATGAATTAAGT
ACTAAACTTAGTGAAATTCAGAGTTAA

Upstream 100 bases:

>100_bases
GATGCTACATAAATGTATAAAAAAATAAAATTTATTCATAAAAATTGGAAATTGATATCTTAAAATCTAAGAATAGTATT
TTACATAGGGGGAAACGTCA

Downstream 100 bases:

>100_bases
AGTTAGTATTGATTTTAGATTATAAATTGAATACCATATGTTAAAACGATTCAATCACTAACATATGGTATTTTTGTTTC
TAAGTAATTATAAATAGTTA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MDNQRIINTKNKILLALFLSSILLRGIFDYYLKVPIRSVISIVGSGIILSIIQLILIKKNCVKQSMYFMVFSISAIGVIL
MSTSPTLSNLMIFYSAIFLIILYQETIPIVLQCISSTVFMSYFFIKNKETIFSNIGYDQLVFLILYIGSGLLICTLLCII
TKRTYITLEEKIKESNEAKSKTELLLSNLSETIEALNEASCTISEGINTTAEVSEQISVASNEVANKATREVETMNNIQS
FMRSGEQGLEEVTSAVEIMSELSSSTKDVVLQGASKVDDLSSEMTKVKDNIISTVKLINNLNEENLKIVKIIDTVSEIAG
QTNLLALNASIEAARAGEHGKGFAVVADEVKKLAENSKESTNQIISILNSISERTNAVSDEIVKEKKSIEVCNEHTDIVK
DLFKNINNNTGNVLNHSDSVNQQIKGLVTVFSKTATEIDSISENVETTASAMEEISANISELNNNIDGISNTYKNIDELS
TKLSEIQS

Sequences:

>Translated_488_residues
MDNQRIINTKNKILLALFLSSILLRGIFDYYLKVPIRSVISIVGSGIILSIIQLILIKKNCVKQSMYFMVFSISAIGVIL
MSTSPTLSNLMIFYSAIFLIILYQETIPIVLQCISSTVFMSYFFIKNKETIFSNIGYDQLVFLILYIGSGLLICTLLCII
TKRTYITLEEKIKESNEAKSKTELLLSNLSETIEALNEASCTISEGINTTAEVSEQISVASNEVANKATREVETMNNIQS
FMRSGEQGLEEVTSAVEIMSELSSSTKDVVLQGASKVDDLSSEMTKVKDNIISTVKLINNLNEENLKIVKIIDTVSEIAG
QTNLLALNASIEAARAGEHGKGFAVVADEVKKLAENSKESTNQIISILNSISERTNAVSDEIVKEKKSIEVCNEHTDIVK
DLFKNINNNTGNVLNHSDSVNQQIKGLVTVFSKTATEIDSISENVETTASAMEEISANISELNNNIDGISNTYKNIDELS
TKLSEIQS
>Mature_488_residues
MDNQRIINTKNKILLALFLSSILLRGIFDYYLKVPIRSVISIVGSGIILSIIQLILIKKNCVKQSMYFMVFSISAIGVIL
MSTSPTLSNLMIFYSAIFLIILYQETIPIVLQCISSTVFMSYFFIKNKETIFSNIGYDQLVFLILYIGSGLLICTLLCII
TKRTYITLEEKIKESNEAKSKTELLLSNLSETIEALNEASCTISEGINTTAEVSEQISVASNEVANKATREVETMNNIQS
FMRSGEQGLEEVTSAVEIMSELSSSTKDVVLQGASKVDDLSSEMTKVKDNIISTVKLINNLNEENLKIVKIIDTVSEIAG
QTNLLALNASIEAARAGEHGKGFAVVADEVKKLAENSKESTNQIISILNSISERTNAVSDEIVKEKKSIEVCNEHTDIVK
DLFKNINNNTGNVLNHSDSVNQQIKGLVTVFSKTATEIDSISENVETTASAMEEISANISELNNNIDGISNTYKNIDELS
TKLSEIQS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=186, Percent_Identity=30.1075268817204, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788195, Length=151, Percent_Identity=35.7615894039735, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI2367378, Length=259, Percent_Identity=26.2548262548263, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787690, Length=174, Percent_Identity=30.4597701149425, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788194, Length=168, Percent_Identity=35.1190476190476, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 53718; Mature: 53718

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQRIINTKNKILLALFLSSILLRGIFDYYLKVPIRSVISIVGSGIILSIIQLILIKKN
CCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
CVKQSMYFMVFSISAIGVILMSTSPTLSNLMIFYSAIFLIILYQETIPIVLQCISSTVFM
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYFFIKNKETIFSNIGYDQLVFLILYIGSGLLICTLLCIITKRTYITLEEKIKESNEAKS
HHHHHCCCHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHH
KTELLLSNLSETIEALNEASCTISEGINTTAEVSEQISVASNEVANKATREVETMNNIQS
HHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMRSGEQGLEEVTSAVEIMSELSSSTKDVVLQGASKVDDLSSEMTKVKDNIISTVKLINN
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LNEENLKIVKIIDTVSEIAGQTNLLALNASIEAARAGEHGKGFAVVADEVKKLAENSKES
CCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHH
TNQIISILNSISERTNAVSDEIVKEKKSIEVCNEHTDIVKDLFKNINNNTGNVLNHSDSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
NQQIKGLVTVFSKTATEIDSISENVETTASAMEEISANISELNNNIDGISNTYKNIDELS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TKLSEIQS
HHHHHHCC
>Mature Secondary Structure
MDNQRIINTKNKILLALFLSSILLRGIFDYYLKVPIRSVISIVGSGIILSIIQLILIKKN
CCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
CVKQSMYFMVFSISAIGVILMSTSPTLSNLMIFYSAIFLIILYQETIPIVLQCISSTVFM
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYFFIKNKETIFSNIGYDQLVFLILYIGSGLLICTLLCIITKRTYITLEEKIKESNEAKS
HHHHHCCCHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHH
KTELLLSNLSETIEALNEASCTISEGINTTAEVSEQISVASNEVANKATREVETMNNIQS
HHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMRSGEQGLEEVTSAVEIMSELSSSTKDVVLQGASKVDDLSSEMTKVKDNIISTVKLINN
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LNEENLKIVKIIDTVSEIAGQTNLLALNASIEAARAGEHGKGFAVVADEVKKLAENSKES
CCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHH
TNQIISILNSISERTNAVSDEIVKEKKSIEVCNEHTDIVKDLFKNINNNTGNVLNHSDSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
NQQIKGLVTVFSKTATEIDSISENVETTASAMEEISANISELNNNIDGISNTYKNIDELS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TKLSEIQS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]