| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933221
Identifier: 187933221
GI number: 187933221
Start: 2817651
End: 2819477
Strand: Reverse
Name: 187933221
Synonym: CLL_A2706
Alternate gene names: NA
Gene position: 2819477-2817651 (Counterclockwise)
Preceding gene: 187935034
Following gene: 187932870
Centisome position: 74.19
GC content: 29.89
Gene sequence:
>1827_bases ATGAACTCAAGATTATGTCCAGGATATTATTCTGCAGATTCAGCTAATTTTTTAGTTGAATATAGAGGAAATTTTAAAAA TGAAATAGATAATGTATCCTACGCTTGTGGAGATATATTAACAAATACTATAGGAGTCATATCATTACCTTATGAATATT TAGATCAAGTATTGATAGATGTTCCATCAATTAAGTTTATTGATTTTAGAAGTATGTCTGTATTGCAAGATATTTCTCCT AATTCAATTGATCAGATATTAGCAATTAAAAAAAATCCATATTTAAATTTAACAGGAAAGGGTGTACTTGTAGGAATTGT AGATACAGGAATAGATTATTTAAACAATGAATTTATTAGAGAGGATGGAACATCAAGAATAGCTGCAATATGGGATCAGA CGATACAGGACGTTAAAGCAGAATCAGTTTATTTAGGAAATATTTATTCTAATGAAGAAATAAATAAAGCAATAAATGCA TATAAAAATAATCAAGATCCCTATTCCATTGTTCCATCAAAAGACGATATAAATCATGGAACTGAAATGGCTGGAATAAT TGGAGCTAGGGGGTATAATGGGGAATTTCAAGGAGTTGCAAATGATTGTGAATTTGTAATTGTAAAACTCTTAGAATCTT TAAATTTTCAAAAAATTTTACAGTCAAACAATGTAAAATACACACCGATATATAACTCTGCCGAAATTGTAGCAGGAATA GAGTATTTAAAAAACTATTCAATAAGTATGAACAAACCTATAGTTATTTATTTAGGTATTGGTGCAACAGAAGGAAGTCA TGACGGTAATAATTTGATTTCAAAATATTTGACTTCTATAGCAAGCATAAGGGGAATCGCCTTAGTTGCAGGAGTTGGTA ATGAAGGAGCAGCAGAAGGTCATGCATCAGGAACTATTGAAAATGTAGGTGAAACAGATAGTATTGAATTAAACATACCC AGGGAAATGAAAAATTTCTCTTTTAATATATGGGTTAAAAGGCCAAATAAAATGTCTCTCAATGTTATTTCACCTACTGG AGAAGAAAGTAGTTTTATTCAAGCTAAAAGAAATAAAAAAGAAGAAATTAATTTTGTCTTTTCAAATGCTAAATTAAAAA TCAATTATTATATGCTAGAAGATTTTTCAGGTCACGAAGTTATTCAAGTGATTTTTGAAGATATAAACCCTGGAATTTGG AAATTTGCTTTAAGAGGAGATTATATAAGTGGTGGCGAGTATAATGCTTGGCTTCAACCTAAAGTTACATTGCCAGAAAA TACAAAGTTTTTAGAACCTGATCCATTTAGTACATTAACAATTCCATCAACTGCAAGAAAAATTATTACAGTTTCTTATC ATGGATTAGTTAATGAGTCTTTAATTGCAACTTCAGGAAAAGGATTTAATACTAATGGTTTAATTAATCCTGATATTGCT ACGGTTGGTATAAACATTTTAACAACAAAGGCATTAGGAGAAACTACTGTTGTATCAGGAAGTTCAGCTGCTACAGCTGT GGTTGCTGGAGTATGTGCATTACTTTTGCAATGGGGAATTGTTGATGGAAATGATACTACTATGTATTCAACAAAAATTA GGAGTTATTTAGTATATGGTGCATATAGAAAGCCTGAACTTGTATATCCAAACAGAGAAACTGGGTATGGAAGCTTTGAC ATATTAGGGACATTTAATATTATAAGTAGAAAATATATACAAACTAGAGAGAATATGAATTTTAGAAATGACAACTTTAT TCAATATCAAGCTGATAAATTATTTCTAAGGATTCCAAAGGAGATGATGCCAGATGCTAAGATATAA
Upstream 100 bases:
>100_bases AAGTTTCTAAAAAATTAAATTTAAAAATAACCCTATACAGAGATTTTTATGATGAACATTGCATAAAAATAATTATAAGT AATATAGGAGCTTTAATAAG
Downstream 100 bases:
>100_bases GTCCAATATGCCTAGAGATATCTTTCATAATACAGATTATAAACACTATATTGTTCAATATCAAGGAAAAATAAATGATG AAGCATTGCAAAAGGAAGGA
Product: CspA
Products: NA
Alternate protein names: Peptidase S8 And S; Subtilase Family Protein; Subtilisin Like Protease; Ser-Type Protease; Germination-Specific Protease; Subtilase Family Domain Protein; Subtilase; Serine-Type Protease; Spore-Cortex-Lytic; Protease CspB; DNA/RNA Non-Specific Endonuclease; Subtilisin-Like Protease
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MNSRLCPGYYSADSANFLVEYRGNFKNEIDNVSYACGDILTNTIGVISLPYEYLDQVLIDVPSIKFIDFRSMSVLQDISP NSIDQILAIKKNPYLNLTGKGVLVGIVDTGIDYLNNEFIREDGTSRIAAIWDQTIQDVKAESVYLGNIYSNEEINKAINA YKNNQDPYSIVPSKDDINHGTEMAGIIGARGYNGEFQGVANDCEFVIVKLLESLNFQKILQSNNVKYTPIYNSAEIVAGI EYLKNYSISMNKPIVIYLGIGATEGSHDGNNLISKYLTSIASIRGIALVAGVGNEGAAEGHASGTIENVGETDSIELNIP REMKNFSFNIWVKRPNKMSLNVISPTGEESSFIQAKRNKKEEINFVFSNAKLKINYYMLEDFSGHEVIQVIFEDINPGIW KFALRGDYISGGEYNAWLQPKVTLPENTKFLEPDPFSTLTIPSTARKIITVSYHGLVNESLIATSGKGFNTNGLINPDIA TVGINILTTKALGETTVVSGSSAATAVVAGVCALLLQWGIVDGNDTTMYSTKIRSYLVYGAYRKPELVYPNRETGYGSFD ILGTFNIISRKYIQTRENMNFRNDNFIQYQADKLFLRIPKEMMPDAKI
Sequences:
>Translated_608_residues MNSRLCPGYYSADSANFLVEYRGNFKNEIDNVSYACGDILTNTIGVISLPYEYLDQVLIDVPSIKFIDFRSMSVLQDISP NSIDQILAIKKNPYLNLTGKGVLVGIVDTGIDYLNNEFIREDGTSRIAAIWDQTIQDVKAESVYLGNIYSNEEINKAINA YKNNQDPYSIVPSKDDINHGTEMAGIIGARGYNGEFQGVANDCEFVIVKLLESLNFQKILQSNNVKYTPIYNSAEIVAGI EYLKNYSISMNKPIVIYLGIGATEGSHDGNNLISKYLTSIASIRGIALVAGVGNEGAAEGHASGTIENVGETDSIELNIP REMKNFSFNIWVKRPNKMSLNVISPTGEESSFIQAKRNKKEEINFVFSNAKLKINYYMLEDFSGHEVIQVIFEDINPGIW KFALRGDYISGGEYNAWLQPKVTLPENTKFLEPDPFSTLTIPSTARKIITVSYHGLVNESLIATSGKGFNTNGLINPDIA TVGINILTTKALGETTVVSGSSAATAVVAGVCALLLQWGIVDGNDTTMYSTKIRSYLVYGAYRKPELVYPNRETGYGSFD ILGTFNIISRKYIQTRENMNFRNDNFIQYQADKLFLRIPKEMMPDAKI >Mature_608_residues MNSRLCPGYYSADSANFLVEYRGNFKNEIDNVSYACGDILTNTIGVISLPYEYLDQVLIDVPSIKFIDFRSMSVLQDISP NSIDQILAIKKNPYLNLTGKGVLVGIVDTGIDYLNNEFIREDGTSRIAAIWDQTIQDVKAESVYLGNIYSNEEINKAINA YKNNQDPYSIVPSKDDINHGTEMAGIIGARGYNGEFQGVANDCEFVIVKLLESLNFQKILQSNNVKYTPIYNSAEIVAGI EYLKNYSISMNKPIVIYLGIGATEGSHDGNNLISKYLTSIASIRGIALVAGVGNEGAAEGHASGTIENVGETDSIELNIP REMKNFSFNIWVKRPNKMSLNVISPTGEESSFIQAKRNKKEEINFVFSNAKLKINYYMLEDFSGHEVIQVIFEDINPGIW KFALRGDYISGGEYNAWLQPKVTLPENTKFLEPDPFSTLTIPSTARKIITVSYHGLVNESLIATSGKGFNTNGLINPDIA TVGINILTTKALGETTVVSGSSAATAVVAGVCALLLQWGIVDGNDTTMYSTKIRSYLVYGAYRKPELVYPNRETGYGSFD ILGTFNIISRKYIQTRENMNFRNDNFIQYQADKLFLRIPKEMMPDAKI
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67412; Mature: 67412
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRLCPGYYSADSANFLVEYRGNFKNEIDNVSYACGDILTNTIGVISLPYEYLDQVLID CCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCHHHHHHHHHHCHHEEECCHHHHHHHHHC VPSIKFIDFRSMSVLQDISPNSIDQILAIKKNPYLNLTGKGVLVGIVDTGIDYLNNEFIR CCCEEEEECCCHHHHHCCCCCCHHHEEEEECCCEEEEECCEEEEEEEHHCHHHHCCHHHH EDGTSRIAAIWDQTIQDVKAESVYLGNIYSNEEINKAINAYKNNQDPYSIVPSKDDINHG CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCC TEMAGIIGARGYNGEFQGVANDCEFVIVKLLESLNFQKILQSNNVKYTPIYNSAEIVAGI CHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCHHHHHHH EYLKNYSISMNKPIVIYLGIGATEGSHDGNNLISKYLTSIASIRGIALVAGVGNEGAAEG HHHHCCCEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCC HASGTIENVGETDSIELNIPREMKNFSFNIWVKRPNKMSLNVISPTGEESSFIQAKRNKK CCCCCCCCCCCCCEEEEECCHHHHCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCC EEINFVFSNAKLKINYYMLEDFSGHEVIQVIFEDINPGIWKFALRGDYISGGEYNAWLQP CEEEEEEECCEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCEECCCCCCEEECE KVTLPENTKFLEPDPFSTLTIPSTARKIITVSYHGLVNESLIATSGKGFNTNGLINPDIA EEECCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCEECCCHH TVGINILTTKALGETTVVSGSSAATAVVAGVCALLLQWGIVDGNDTTMYSTKIRSYLVYG EEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHEEEEEE AYRKPELVYPNRETGYGSFDILGTFNIISRKYIQTRENMNFRNDNFIQYQADKLFLRIPK CCCCCCEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCH EMMPDAKI HHCCCCCC >Mature Secondary Structure MNSRLCPGYYSADSANFLVEYRGNFKNEIDNVSYACGDILTNTIGVISLPYEYLDQVLID CCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCHHHHHHHHHHCHHEEECCHHHHHHHHHC VPSIKFIDFRSMSVLQDISPNSIDQILAIKKNPYLNLTGKGVLVGIVDTGIDYLNNEFIR CCCEEEEECCCHHHHHCCCCCCHHHEEEEECCCEEEEECCEEEEEEEHHCHHHHCCHHHH EDGTSRIAAIWDQTIQDVKAESVYLGNIYSNEEINKAINAYKNNQDPYSIVPSKDDINHG CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCC TEMAGIIGARGYNGEFQGVANDCEFVIVKLLESLNFQKILQSNNVKYTPIYNSAEIVAGI CHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCHHHHHHH EYLKNYSISMNKPIVIYLGIGATEGSHDGNNLISKYLTSIASIRGIALVAGVGNEGAAEG HHHHCCCEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCC HASGTIENVGETDSIELNIPREMKNFSFNIWVKRPNKMSLNVISPTGEESSFIQAKRNKK CCCCCCCCCCCCCEEEEECCHHHHCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCC EEINFVFSNAKLKINYYMLEDFSGHEVIQVIFEDINPGIWKFALRGDYISGGEYNAWLQP CEEEEEEECCEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCEECCCCCCEEECE KVTLPENTKFLEPDPFSTLTIPSTARKIITVSYHGLVNESLIATSGKGFNTNGLINPDIA EEECCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCEECCCHH TVGINILTTKALGETTVVSGSSAATAVVAGVCALLLQWGIVDGNDTTMYSTKIRSYLVYG EEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHEEEEEE AYRKPELVYPNRETGYGSFDILGTFNIISRKYIQTRENMNFRNDNFIQYQADKLFLRIPK CCCCCCEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCH EMMPDAKI HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA