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The map label for this gene is ynbB [H]

Identifier: 187933104

GI number: 187933104

Start: 1898196

End: 1899485

Strand: Reverse

Name: ynbB [H]

Synonym: CLL_A1815

Alternate gene names: 187933104

Gene position: 1899485-1898196 (Counterclockwise)

Preceding gene: 187934496

Following gene: 187934655

Centisome position: 49.98

GC content: 31.71

Gene sequence:

>1290_bases
ATGTTAAAGAAAACAGAAGAATTTCTTATTAATAAGTACAATGTTAGTGAGGAAGCATTTAAATTATACAAACAAGCTCT
AAAAGAAACAAAAGATATCTTTGAAGAGTACGATGAAATAAGAGAATTTAATCAACTTAAAGTATTAAAAGCTTTTCAAG
AAGAGAGAATAAGTGAATCACATTTTACTAATACAACAGGATATGGACTTGATGATTTCGGAAGAGATACTTTAGATAGA
GTTTATGCTAGAATATTTAAAGCAGAATTAGGATTAGTTAGACCAAACTTTGTAAGTGGAACTCATGCTATAGGCGCTGC
TATGATGGGGAATGTAAGACCTGGTGATAAAATACTGTGTGTTTCAGGAATGCCTTATGATACACTTTTAGGAGTATTAG
GACTTGCTGATAAAAAAACTAAAGGTTCATTAGATGAATATAATATAAAAACAGATGTTATTGAATTAGATGAGAATGGA
AAATTTAAATTTGATAAAATTAAAGAAACATTAAAAAGTGATAAAGCTATAAAGCTAATACATATACAAAGAAGCACAGG
ATATGCTTCTAGAAAATCTTTCTTAGTTTCAGAAATTGAAGAAGTAATAAAATGCATAAAGGAAGTAAGAGAAGATGTTG
TAATATTTGTAGATAACTGTTATGGGGAATTTATAGAAGAAATTGAACCGACAGAAGTTGGAGCAGATCTTATGGCAGGA
TCTCTTATGAAAAACATAGGTGGAGGTATTGCTCCAGGTGGTGGATACATAGTTGGTAAAAAAGAGTATGTTGAACAAGC
ATCTTATAGATTTACTGTTCCTGGAATAGGAGGAGAGTATGGTGCAACTTACGGACTTATGAGAAGTTTATATCAAGGAT
TATTTTCAGCACCACATGTTTCTATGGAGGCTGTAAAAACAGCAATATTCTGTGCTAAAACAATGGAGCTTGCTGGATTT
AAAGGATTCCCAGCATCCACTGATAAAAGAACTGATATAATACAAGCTATACAATTTGGTGATCCTACAAAATTAATTCA
ATTTTGTAACGGAATTCAAGCGGCTTCACCAATTGATGCATTTGCTGTGTGTGAACCATGGGCAATGCCAGGATATGATA
GTGAAATAATAATGGCAGCTGGTGCATTTATATCTGGATCAACAATTGAATTATCTGCAGATGGTCCAATAAGAGAACCT
TATATAGCTTATATGCAAGGTGGTTTAAATTTTGATCACGGTAAAATAGGAATTTTAATAGGATTAAGTAAAGTACTTGA
AGTAAAATAA

Upstream 100 bases:

>100_bases
TTTATTTGTAGATAATGAAAGCTAAAATAAATAGGCAATTAATTGCCTATTTATTTTTGAGAAAATATATTTATAATACC
TAGGAGGAGAATAGACTGAA

Downstream 100 bases:

>100_bases
CTAAAAATTTTATTAATTTAATTAATACTGAACATAAAAAAGCTGAAATACTACATTATAACTTAGTATTTCAGCTCATA
ACTTTTTAGAACTAATTAAA

Product: aluminium resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MLKKTEEFLINKYNVSEEAFKLYKQALKETKDIFEEYDEIREFNQLKVLKAFQEERISESHFTNTTGYGLDDFGRDTLDR
VYARIFKAELGLVRPNFVSGTHAIGAAMMGNVRPGDKILCVSGMPYDTLLGVLGLADKKTKGSLDEYNIKTDVIELDENG
KFKFDKIKETLKSDKAIKLIHIQRSTGYASRKSFLVSEIEEVIKCIKEVREDVVIFVDNCYGEFIEEIEPTEVGADLMAG
SLMKNIGGGIAPGGGYIVGKKEYVEQASYRFTVPGIGGEYGATYGLMRSLYQGLFSAPHVSMEAVKTAIFCAKTMELAGF
KGFPASTDKRTDIIQAIQFGDPTKLIQFCNGIQAASPIDAFAVCEPWAMPGYDSEIIMAAGAFISGSTIELSADGPIREP
YIAYMQGGLNFDHGKIGILIGLSKVLEVK

Sequences:

>Translated_429_residues
MLKKTEEFLINKYNVSEEAFKLYKQALKETKDIFEEYDEIREFNQLKVLKAFQEERISESHFTNTTGYGLDDFGRDTLDR
VYARIFKAELGLVRPNFVSGTHAIGAAMMGNVRPGDKILCVSGMPYDTLLGVLGLADKKTKGSLDEYNIKTDVIELDENG
KFKFDKIKETLKSDKAIKLIHIQRSTGYASRKSFLVSEIEEVIKCIKEVREDVVIFVDNCYGEFIEEIEPTEVGADLMAG
SLMKNIGGGIAPGGGYIVGKKEYVEQASYRFTVPGIGGEYGATYGLMRSLYQGLFSAPHVSMEAVKTAIFCAKTMELAGF
KGFPASTDKRTDIIQAIQFGDPTKLIQFCNGIQAASPIDAFAVCEPWAMPGYDSEIIMAAGAFISGSTIELSADGPIREP
YIAYMQGGLNFDHGKIGILIGLSKVLEVK
>Mature_429_residues
MLKKTEEFLINKYNVSEEAFKLYKQALKETKDIFEEYDEIREFNQLKVLKAFQEERISESHFTNTTGYGLDDFGRDTLDR
VYARIFKAELGLVRPNFVSGTHAIGAAMMGNVRPGDKILCVSGMPYDTLLGVLGLADKKTKGSLDEYNIKTDVIELDENG
KFKFDKIKETLKSDKAIKLIHIQRSTGYASRKSFLVSEIEEVIKCIKEVREDVVIFVDNCYGEFIEEIEPTEVGADLMAG
SLMKNIGGGIAPGGGYIVGKKEYVEQASYRFTVPGIGGEYGATYGLMRSLYQGLFSAPHVSMEAVKTAIFCAKTMELAGF
KGFPASTDKRTDIIQAIQFGDPTKLIQFCNGIQAASPIDAFAVCEPWAMPGYDSEIIMAAGAFISGSTIELSADGPIREP
YIAYMQGGLNFDHGKIGILIGLSKVLEVK

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 47370; Mature: 47370

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKTEEFLINKYNVSEEAFKLYKQALKETKDIFEEYDEIREFNQLKVLKAFQEERISES
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFTNTTGYGLDDFGRDTLDRVYARIFKAELGLVRPNFVSGTHAIGAAMMGNVRPGDKILC
HCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEE
VSGMPYDTLLGVLGLADKKTKGSLDEYNIKTDVIELDENGKFKFDKIKETLKSDKAIKLI
ECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHCCCCCEEEE
HIQRSTGYASRKSFLVSEIEEVIKCIKEVREDVVIFVDNCYGEFIEEIEPTEVGADLMAG
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHCCCHHHHHHHHHH
SLMKNIGGGIAPGGGYIVGKKEYVEQASYRFTVPGIGGEYGATYGLMRSLYQGLFSAPHV
HHHHHHCCCCCCCCCEEECCHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC
SMEAVKTAIFCAKTMELAGFKGFPASTDKRTDIIQAIQFGDPTKLIQFCNGIQAASPIDA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCH
FAVCEPWAMPGYDSEIIMAAGAFISGSTIELSADGPIREPYIAYMQGGLNFDHGKIGILI
HHHCCCCCCCCCCCCEEEEECCEECCCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEE
GLSKVLEVK
EHHHHHCCC
>Mature Secondary Structure
MLKKTEEFLINKYNVSEEAFKLYKQALKETKDIFEEYDEIREFNQLKVLKAFQEERISES
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFTNTTGYGLDDFGRDTLDRVYARIFKAELGLVRPNFVSGTHAIGAAMMGNVRPGDKILC
HCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEE
VSGMPYDTLLGVLGLADKKTKGSLDEYNIKTDVIELDENGKFKFDKIKETLKSDKAIKLI
ECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHCCCCCEEEE
HIQRSTGYASRKSFLVSEIEEVIKCIKEVREDVVIFVDNCYGEFIEEIEPTEVGADLMAG
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHCCCHHHHHHHHHH
SLMKNIGGGIAPGGGYIVGKKEYVEQASYRFTVPGIGGEYGATYGLMRSLYQGLFSAPHV
HHHHHHCCCCCCCCCEEECCHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC
SMEAVKTAIFCAKTMELAGFKGFPASTDKRTDIIQAIQFGDPTKLIQFCNGIQAASPIDA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCH
FAVCEPWAMPGYDSEIIMAAGAFISGSTIELSADGPIREPYIAYMQGGLNFDHGKIGILI
HHHCCCCCCCCCCCCEEEEECCEECCCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEE
GLSKVLEVK
EHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]